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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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500 nt
flgJ and flgI overlap by 1 nucleotides
flgI and flgH are separated by 11 nucleotides
flgH and flgG are separated by 52 nucleotides
flgG and flgF are separated by 137 nucleotides
JDDGAC_07295: flgJ - flagellar assembly peptidoglycan hydrolase FlgJ, at 1,267,502 to 1,268,443
flgJ
JDDGAC_07300: flgI - flagellar basal body P-ring protein FlgI, at 1,268,443 to 1,269,540
flgI
JDDGAC_07305: flgH - flagellar basal body L-ring protein FlgH, at 1,269,552 to 1,270,250
flgH
JDDGAC_07310: flgG - flagellar basal-body rod protein FlgG, at 1,270,303 to 1,271,085
flgG
JDDGAC_07315: flgF - flagellar basal-body rod protein FlgF, at 1,271,223 to 1,271,978
flgF
Group
Condition
JDDGAC
_07295
JDDGAC
_07300
JDDGAC
_07305
JDDGAC
_07310
JDDGAC
_07315
flgJ
flgI
flgH
flgG
flgF
phage
WM_EV240
-0.1
-0.8
-0.7
-1.1
-0.1
no phage control
Control_ECRC98_WM
-0.6
-0.1
-0.4
-0.4
-0.3
phage
WM_EV240
+0.2
-0.3
-0.1
-0.8
-0.6
phage
WM_TP12
+0.2
-0.2
-0.6
-0.2
-0.5
phage
WM_JK32
+0.2
-0.4
-0.4
-0.1
-0.2
phage
WM_Bas09
+0.2
-0.1
-0.4
-0.3
-0.2
phage
WM_JK45
+0.2
-0.1
-0.1
-0.3
-0.3
phage
WM_K30
-0.0
+0.1
-0.2
-0.2
-0.3
phage
WM_JK45
-0.0
-0.1
-0.1
-0.1
-0.1
phage
WM_Bas31
-0.0
+0.3
-0.2
+0.1
-0.3
phage
WM_TP12
+0.1
-0.1
-0.2
+0.2
-0.1
no phage control
Control_ECRC98_WM
-0.1
+0.4
-0.1
-0.4
+0.2
phage
WM_Bas31
-0.1
+0.5
-0.1
+0.1
-0.4
phage
WM_JK32
+0.3
+0.1
+0.0
-0.5
+0.3
no phage control
Control_ECRC98_WM
+0.3
+0.2
-0.0
+0.1
-0.5
phage
WM_Bas09
+0.7
+0.2
-0.6
+0.2
-0.2
phage
WM_K30
+0.5
+0.4
+0.1
+0.1
-0.1
no phage control
Control_ECRC98_WM
+0.5
+0.3
+0.2
+0.3
-0.1
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