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Protein
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Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
ompT and menH are separated by 186 nucleotides
menH and JDDGAC_06330 are separated by 302 nucleotides
JDDGAC_06330 and tnpB are separated by 49 nucleotides
tnpB and tnpB overlap by 4 nucleotides
JDDGAC_06320: ompT - omptin family outer membrane protease OmpT, at 1,104,585 to 1,105,538
ompT
JDDGAC_06325: menH - alpha/beta hydrolase, at 1,105,725 to 1,107,209
menH
JDDGAC_06330: JDDGAC_06330 - IS66-like element ISEc8 family transposase, at 1,107,512 to 1,109,050
_06330
JDDGAC_06335: tnpB - IS66 family insertion sequence element accessory protein TnpB, at 1,109,100 to 1,109,447
tnpB
JDDGAC_06340: tnpB - IS66 family insertion sequence element accessory protein TnpB, at 1,109,444 to 1,109,824
tnpB
Group
Condition
JDDGAC
_06320
JDDGAC
_06325
JDDGAC
_06330
JDDGAC
_06335
JDDGAC
_06340
ompT
menH
tnpB
tnpB
phage
WM_K30
-0.1
-0.3
N.D.
N.D.
N.D.
no phage control
Control_ECRC98_WM
-0.3
-0.0
N.D.
N.D.
N.D.
phage
WM_JK32
-0.1
-0.0
N.D.
N.D.
N.D.
phage
WM_K30
+0.2
-0.2
N.D.
N.D.
N.D.
phage
WM_JK45
-0.1
+0.1
N.D.
N.D.
N.D.
phage
WM_TP12
-0.4
+0.4
N.D.
N.D.
N.D.
phage
WM_JK32
+0.1
-0.1
N.D.
N.D.
N.D.
phage
WM_TP12
-0.0
+0.1
N.D.
N.D.
N.D.
phage
WM_JK45
+0.2
-0.2
N.D.
N.D.
N.D.
phage
WM_Bas31
-0.3
+0.4
N.D.
N.D.
N.D.
phage
WM_EV240
+0.4
-0.2
N.D.
N.D.
N.D.
phage
WM_Bas09
+0.1
+0.3
N.D.
N.D.
N.D.
phage
WM_Bas31
+0.0
+0.3
N.D.
N.D.
N.D.
no phage control
Control_ECRC98_WM
+0.0
+0.3
N.D.
N.D.
N.D.
no phage control
Control_ECRC98_WM
+0.4
+0.0
N.D.
N.D.
N.D.
phage
WM_EV240
+0.3
+0.2
N.D.
N.D.
N.D.
no phage control
Control_ECRC98_WM
+0.0
+0.6
N.D.
N.D.
N.D.
phage
WM_Bas09
+0.4
+0.9
N.D.
N.D.
N.D.
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