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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
ycjS and ycjR are separated by 9 nucleotides
ycjR and ycjQ are separated by 17 nucleotides
ycjQ and ycjP are separated by 30 nucleotides
ycjP and ugpA overlap by 14 nucleotides
JDDGAC_04890: ycjS - D-glucoside 3-dehydrogenase, at 852,214 to 853,269
ycjS
JDDGAC_04895: ycjR - 3-dehydro-D-guloside 4-epimerase, at 853,279 to 854,067
ycjR
JDDGAC_04900: ycjQ - D-guloside 3-dehydrogenase, at 854,085 to 855,137
ycjQ
JDDGAC_04905: ycjP - Inner membrane ABC transporter permease protein YcjP, at 855,168 to 856,010
ycjP
JDDGAC_04910: ugpA - sugar ABC transporter permease, at 855,997 to 856,878
ugpA
Group
Condition
JDDGAC
_04890
JDDGAC
_04895
JDDGAC
_04900
JDDGAC
_04905
JDDGAC
_04910
ycjS
ycjR
ycjQ
ycjP
ugpA
phage
WM_K30
-0.1
-1.1
+0.3
-0.3
-0.1
phage
WM_JK45
-0.0
-0.3
-0.2
-0.2
-0.2
phage
WM_Bas31
-0.2
-0.5
+0.0
-0.1
+0.1
phage
WM_TP12
-0.0
-0.4
-0.2
+0.0
+0.0
phage
WM_JK45
+0.1
-0.6
-0.2
+0.1
+0.0
phage
WM_Bas31
-0.2
-0.6
-0.1
+0.1
+0.2
no phage control
Control_ECRC98_WM
-0.2
-0.1
-0.4
-0.1
+0.3
phage
WM_Bas09
-0.2
-0.0
-0.3
-0.0
+0.1
no phage control
Control_ECRC98_WM
-0.1
-0.4
+0.1
+0.2
-0.1
phage
WM_TP12
+0.1
-0.3
+0.2
-0.3
+0.1
phage
WM_K30
-0.0
-0.2
-0.1
-0.1
+0.3
phage
WM_Bas09
-0.4
+0.4
-0.2
+0.0
+0.0
phage
WM_JK32
+0.1
-0.5
+0.1
+0.1
+0.2
no phage control
Control_ECRC98_WM
-0.2
-0.1
-0.0
+0.2
+0.6
phage
WM_JK32
+0.3
+0.4
+0.3
-0.2
-0.1
phage
WM_EV240
+0.1
+0.2
+0.0
+0.3
+0.1
phage
WM_EV240
+0.1
+0.4
+0.3
-0.2
+0.1
no phage control
Control_ECRC98_WM
+0.3
-0.0
+0.3
+0.1
+0.4
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