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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
mppA and pgrR are separated by 328 nucleotides
pgrR and ycjY are separated by 137 nucleotides
ycjY and JDDGAC_04820 overlap by 1 nucleotides
JDDGAC_04820 and frsA overlap by 40 nucleotides
JDDGAC_04805: mppA - murein tripeptide ABC transporter substrate-binding protein MppA, at 833,723 to 835,336
mppA
JDDGAC_04810: pgrR - DNA-binding transcriptional regulator PgrR, at 835,665 to 836,564
pgrR
JDDGAC_04815: ycjY - Uncharacterized protein YcjY, at 836,702 to 837,622
ycjY
JDDGAC_04820: JDDGAC_04820 - Peptidase-S15 domain-containing protein, at 837,622 to 838,002
_04820
JDDGAC_04825: frsA - alpha/beta hydrolase, at 837,963 to 838,553
frsA
Group
Condition
JDDGAC
_04805
JDDGAC
_04810
JDDGAC
_04815
JDDGAC
_04820
JDDGAC
_04825
mppA
pgrR
ycjY
frsA
phage
WM_Bas09
+0.1
-0.7
-0.3
-0.7
+0.2
phage
WM_JK32
-0.2
-0.3
-0.0
+0.3
-0.7
phage
WM_EV240
-0.9
+0.1
-0.6
+0.8
-0.3
no phage control
Control_ECRC98_WM
-0.2
+0.0
+0.2
-0.6
-0.1
phage
WM_Bas09
-0.8
-0.0
-0.6
+0.4
+0.4
phage
WM_TP12
-0.2
-0.1
-0.0
-0.2
+0.2
phage
WM_K30
-0.4
+0.3
-0.0
-0.2
-0.0
no phage control
Control_ECRC98_WM
-0.6
-0.0
+0.2
+0.0
+0.1
phage
WM_JK45
-0.5
-0.5
-0.1
-0.1
+1.0
phage
WM_TP12
+0.1
-0.3
-0.2
+0.1
+0.3
no phage control
Control_ECRC98_WM
-0.3
-0.6
+0.1
+0.4
+0.3
phage
WM_K30
-0.4
+0.1
-0.0
+0.1
+0.2
phage
WM_Bas31
+0.3
+0.1
+0.3
-0.3
+0.3
no phage control
Control_ECRC98_WM
-0.6
+0.3
+0.2
+0.0
+0.8
phage
WM_JK32
+0.4
-0.3
+0.1
+0.4
+0.2
phage
WM_JK45
+0.1
+0.2
+0.6
-0.3
+0.2
phage
WM_Bas31
-0.1
+0.1
+0.1
-0.2
+1.0
phage
WM_EV240
-0.3
+0.5
+0.3
+0.8
+1.0
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