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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
ynaJ and ynaI are separated by 243 nucleotides
ynaI and mppA are separated by 50 nucleotides
mppA and pgrR are separated by 328 nucleotides
pgrR and ycjY are separated by 137 nucleotides
JDDGAC_04795: ynaJ - Uncharacterized protein YnaJ, at 832,140 to 832,397
ynaJ
JDDGAC_04800: ynaI - low conductance mechanosensitive channel YnaI, at 832,641 to 833,672
ynaI
JDDGAC_04805: mppA - murein tripeptide ABC transporter substrate-binding protein MppA, at 833,723 to 835,336
mppA
JDDGAC_04810: pgrR - DNA-binding transcriptional regulator PgrR, at 835,665 to 836,564
pgrR
JDDGAC_04815: ycjY - Uncharacterized protein YcjY, at 836,702 to 837,622
ycjY
Group
Condition
JDDGAC
_04795
JDDGAC
_04800
JDDGAC
_04805
JDDGAC
_04810
JDDGAC
_04815
ynaJ
ynaI
mppA
pgrR
ycjY
phage
WM_Bas09
-0.2
-0.7
-0.8
-0.0
-0.6
phage
WM_EV240
-0.5
-0.2
-0.9
+0.1
-0.6
phage
WM_JK45
-0.2
-0.2
-0.5
-0.5
-0.1
no phage control
Control_ECRC98_WM
-0.4
-0.3
-0.3
-0.6
+0.1
phage
WM_JK32
-0.3
-0.2
-0.2
-0.3
-0.0
phage
WM_Bas09
-0.2
+0.3
+0.1
-0.7
-0.3
phage
WM_K30
-0.0
-0.4
-0.4
+0.1
-0.0
no phage control
Control_ECRC98_WM
-0.2
+0.1
-0.6
-0.0
+0.2
phage
WM_TP12
+0.2
-0.2
-0.2
-0.1
-0.0
phage
WM_EV240
-0.8
-0.1
-0.3
+0.5
+0.3
no phage control
Control_ECRC98_WM
-0.3
+0.1
-0.6
+0.3
+0.2
phage
WM_K30
-0.1
-0.1
-0.4
+0.3
-0.0
phage
WM_Bas31
-0.0
-0.4
-0.1
+0.1
+0.1
phage
WM_TP12
+0.4
-0.3
+0.1
-0.3
-0.2
no phage control
Control_ECRC98_WM
-0.1
+0.0
-0.2
+0.0
+0.2
phage
WM_JK32
+0.3
-0.1
+0.4
-0.3
+0.1
phage
WM_JK45
+0.4
-0.7
+0.1
+0.2
+0.6
phage
WM_Bas31
+0.5
+0.1
+0.3
+0.1
+0.3
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