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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
ddpA and ddpB are separated by 1 nucleotides
ddpB and ddpC overlap by 4 nucleotides
ddpC and dppD overlap by 4 nucleotides
dppD and ddpF overlap by 8 nucleotides
JDDGAC_03810: ddpA - putative D,D-dipeptide-binding periplasmic protein DdpA, at 655,473 to 657,023
ddpA
JDDGAC_03815: ddpB - putative D,D-dipeptide transport system permease protein DdpB, at 657,025 to 658,047
ddpB
JDDGAC_03820: ddpC - D,D-dipeptide ABC transporter permease, at 658,044 to 658,940
ddpC
JDDGAC_03825: dppD - ABC transporter ATP-binding protein, at 658,937 to 659,923
dppD
JDDGAC_03830: ddpF - putative D,D-dipeptide transport ATP-binding protein DdpF, at 659,916 to 660,842
ddpF
Group
Condition
JDDGAC
_03810
JDDGAC
_03815
JDDGAC
_03820
JDDGAC
_03825
JDDGAC
_03830
ddpA
ddpB
ddpC
dppD
ddpF
no phage control
Control_ECRC98_WM
+0.1
-0.1
-0.0
-0.5
+0.1
phage
WM_JK32
-0.2
+0.3
+0.2
-0.1
-0.4
phage
WM_EV240
+0.8
-0.4
-0.8
+0.1
+0.0
phage
WM_TP12
+0.1
+0.1
-0.1
+0.2
-0.1
phage
WM_JK45
+0.1
+0.3
-0.3
+0.2
-0.1
phage
WM_K30
+0.2
+0.2
-0.3
+0.1
+0.0
no phage control
Control_ECRC98_WM
+0.0
+0.5
+0.1
-0.2
-0.1
phage
WM_K30
-0.0
+0.4
+0.0
+0.1
-0.1
phage
WM_EV240
+0.4
+0.4
-0.6
+0.1
+0.1
phage
WM_Bas31
+0.2
+0.0
+0.2
-0.2
+0.3
phage
WM_JK32
-0.0
+0.2
+0.0
-0.0
+0.5
no phage control
Control_ECRC98_WM
+0.1
+0.8
+0.1
-0.4
-0.0
phage
WM_Bas31
+0.4
+0.2
-0.3
-0.0
+0.4
no phage control
Control_ECRC98_WM
+0.4
+0.5
-0.6
+0.6
+0.1
phage
WM_TP12
+0.1
+0.8
-0.0
+0.2
+0.1
phage
WM_JK45
+0.0
+0.3
+0.5
+0.2
+0.2
phage
WM_Bas09
-0.1
+0.3
-0.3
+1.0
+0.3
phage
WM_Bas09
-0.9
+0.5
+0.5
+0.5
+0.7
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JDDGAC_03820
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