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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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500 nt
glsB and yneG overlap by 1 nucleotides
yneG and gGDEF are separated by 138 nucleotides
gGDEF and uxaB are separated by 226 nucleotides
uxaB and tam are separated by 277 nucleotides
JDDGAC_03625: glsB - glutaminase B, at 602,863 to 603,789
glsB
JDDGAC_03630: yneG - Uncharacterized protein YneG, at 603,789 to 604,148
yneG
JDDGAC_03635: gGDEF - diguanylate cyclase, at 604,287 to 605,705
gGDEF
JDDGAC_03640: uxaB - tagaturonate reductase, at 605,932 to 607,383
uxaB
JDDGAC_03645: tam - trans-aconitate 2-methyltransferase, at 607,661 to 607,927
tam
Group
Condition
JDDGAC
_03625
JDDGAC
_03630
JDDGAC
_03635
JDDGAC
_03640
JDDGAC
_03645
glsB
yneG
gGDEF
uxaB
tam
phage
WM_JK32
+0.3
-0.9
+0.3
-0.7
-2.3
phage
WM_TP12
+0.5
-1.4
-0.2
-0.6
-1.4
phage
WM_EV240
-1.6
+0.4
-0.5
-0.2
-0.7
no phage control
Control_ECRC98_WM
-0.0
+0.2
+0.1
-1.8
-0.6
no phage control
Control_ECRC98_WM
+0.0
-1.4
+0.3
+0.1
-0.7
no phage control
Control_ECRC98_WM
+0.1
-0.1
+0.1
-1.6
-0.1
phage
WM_EV240
+0.2
-1.5
-0.1
+1.5
-1.3
phage
WM_JK45
-0.2
+0.5
+0.1
-0.3
-1.4
no phage control
Control_ECRC98_WM
+0.3
+0.2
-0.1
+0.5
-1.8
phage
WM_Bas31
+0.5
-0.5
+0.4
-0.2
-0.8
phage
WM_Bas09
+0.1
-0.1
+0.2
-0.3
-0.5
phage
WM_K30
+0.1
+0.3
+0.1
-0.6
-0.3
phage
WM_Bas31
+0.4
+0.1
-0.4
+0.0
-0.5
phage
WM_JK32
+0.3
+0.2
-0.0
-0.1
-0.5
phage
WM_K30
+0.3
+0.3
-0.2
-0.9
+0.5
phage
WM_Bas09
+1.1
-0.3
+0.0
-0.1
-0.2
phage
WM_TP12
-0.3
-0.2
+0.2
+0.4
+0.8
phage
WM_JK45
+0.2
+0.6
+0.9
+0.8
-0.1
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