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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
ynhF and ydhP are separated by 165 nucleotides
ydhP and sodB are separated by 145 nucleotides
sodB and mepH are separated by 127 nucleotides
mepH and grxD are separated by 334 nucleotides
JDDGAC_01985: ynhF - stress response protein YnhF, at 353,297 to 353,386
ynhF
JDDGAC_01990: ydhP - Inner membrane transport protein YdhP, at 353,552 to 354,721
ydhP
JDDGAC_01995: sodB - superoxide dismutase [Fe], at 354,867 to 355,448
sodB
JDDGAC_02000: mepH - peptidoglycan DD-endopeptidase MepH, at 355,576 to 356,391
mepH
JDDGAC_02005: grxD - monothiol glutaredoxin 4, at 356,726 to 357,073
grxD
Group
Condition
JDDGAC
_01985
JDDGAC
_01990
JDDGAC
_01995
JDDGAC
_02000
JDDGAC
_02005
ynhF
ydhP
sodB
mepH
grxD
phage
WM_Bas09
N.D.
-0.0
-0.7
-0.8
-1.0
phage
WM_JK45
N.D.
-0.4
-0.6
-0.9
-0.5
phage
WM_K30
N.D.
-0.3
-0.3
+0.2
-0.4
phage
WM_JK45
N.D.
-0.2
-0.3
+0.3
-0.3
no phage control
Control_ECRC98_WM
N.D.
-0.4
-0.3
+0.3
+0.3
phage
WM_JK32
N.D.
-0.4
-0.4
+0.5
+0.3
phage
WM_Bas09
N.D.
-0.3
-0.3
+1.0
-0.4
phage
WM_JK32
N.D.
-0.2
-0.1
+0.9
-0.1
no phage control
Control_ECRC98_WM
N.D.
-0.5
+0.3
+0.9
-0.2
phage
WM_TP12
N.D.
-0.1
-0.1
+0.4
+0.4
phage
WM_TP12
N.D.
-0.2
-0.0
+0.5
+0.5
phage
WM_Bas31
N.D.
-0.2
+0.1
+0.3
+0.6
no phage control
Control_ECRC98_WM
N.D.
+0.0
-0.5
+1.0
+0.3
no phage control
Control_ECRC98_WM
N.D.
-0.0
-0.5
+0.8
+0.6
phage
WM_K30
N.D.
-0.2
+0.0
+0.8
+0.4
phage
WM_EV240
N.D.
-0.3
-1.0
+1.4
+1.2
phage
WM_EV240
N.D.
-0.3
-0.8
+1.8
+0.9
phage
WM_Bas31
N.D.
-0.0
-0.3
+1.3
+0.9
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