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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
chbC and chbA are separated by 50 nucleotides
chbA and chbR are separated by 10 nucleotides
chbR and celF are separated by 105 nucleotides
celF and chbG are separated by 12 nucleotides
JDDGAC_01540: chbC - PTS N,N'-diacetylchitobiose transporter subunit IIC, at 268,514 to 269,872
chbC
JDDGAC_01545: chbA - PTS N,N'-diacetylchitobiose transporter subunit IIA, at 269,923 to 270,273
chbA
JDDGAC_01550: chbR - transcriptional regulator ChbR, at 270,284 to 271,123
chbR
JDDGAC_01555: celF - 6-phospho-beta-glucosidase, at 271,229 to 272,581
celF
JDDGAC_01560: chbG - chitin disaccharide deacetylase, at 272,594 to 273,352
chbG
Group
Condition
JDDGAC
_01540
JDDGAC
_01545
JDDGAC
_01550
JDDGAC
_01555
JDDGAC
_01560
chbC
chbA
chbR
celF
chbG
phage
WM_Bas09
+0.1
N.D.
-2.1
+0.5
-0.7
no phage control
Control_ECRC98_WM
-0.2
N.D.
-1.7
+0.3
-0.1
phage
WM_JK32
-0.0
N.D.
-0.9
-0.1
+0.1
phage
WM_EV240
-0.0
N.D.
-0.2
-0.7
+0.1
phage
WM_Bas31
+0.1
N.D.
-0.1
-0.3
-0.0
phage
WM_JK45
-0.2
N.D.
+0.2
-0.1
-0.1
phage
WM_JK32
-0.0
N.D.
-0.1
-0.1
+0.2
no phage control
Control_ECRC98_WM
-0.2
N.D.
+0.3
+0.2
-0.4
phage
WM_TP12
-0.1
N.D.
-0.3
+0.5
-0.0
phage
WM_TP12
-0.2
N.D.
-0.3
+0.2
+0.3
phage
WM_K30
+0.2
N.D.
-0.3
+0.2
+0.2
no phage control
Control_ECRC98_WM
-0.1
N.D.
+0.3
+0.3
-0.1
phage
WM_K30
-0.3
N.D.
+0.2
+0.3
+0.3
no phage control
Control_ECRC98_WM
+0.2
N.D.
+0.4
-0.1
+0.1
phage
WM_Bas09
+0.2
N.D.
-0.1
+0.6
+0.4
phage
WM_Bas31
+0.2
N.D.
+0.9
-0.0
+0.1
phage
WM_EV240
+1.2
N.D.
-0.4
+0.5
+0.0
phage
WM_JK45
+0.3
N.D.
+0.9
+0.3
+0.2
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