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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
cho and nadE are separated by 229 nucleotides
nadE and osmE are separated by 201 nucleotides
osmE and chbB are separated by 299 nucleotides
chbB and chbC are separated by 84 nucleotides
JDDGAC_01515: cho - excinuclease Cho, at 265,325 to 266,212
cho
JDDGAC_01525: nadE - ammonia-dependent NAD(+) synthetase, at 266,442 to 267,269
nadE
JDDGAC_01530: osmE - osmotically-inducible lipoprotein OsmE, at 267,471 to 267,809
osmE
JDDGAC_01535: chbB - PTS N,N'-diacetylchitobiose transporter subunit IIB, at 268,109 to 268,429
chbB
JDDGAC_01540: chbC - PTS N,N'-diacetylchitobiose transporter subunit IIC, at 268,514 to 269,872
chbC
Group
Condition
JDDGAC
_01515
JDDGAC
_01525
JDDGAC
_01530
JDDGAC
_01535
JDDGAC
_01540
cho
nadE
osmE
chbB
chbC
no phage control
Control_ECRC98_WM
-0.4
N.D.
-0.3
-0.1
-0.2
phage
WM_TP12
-0.0
N.D.
-0.3
-0.2
-0.1
phage
WM_JK45
-0.3
N.D.
-0.2
-0.5
+0.3
phage
WM_TP12
-0.2
N.D.
-0.3
+0.3
-0.2
phage
WM_Bas31
+0.0
N.D.
-0.8
+0.3
+0.2
phage
WM_JK32
-0.3
N.D.
-0.2
+0.4
-0.0
no phage control
Control_ECRC98_WM
-0.1
N.D.
-0.3
+0.0
+0.2
phage
WM_JK45
-0.1
N.D.
+0.2
+0.2
-0.2
phage
WM_Bas09
-0.5
N.D.
+0.1
+0.5
+0.1
phage
WM_K30
-0.0
N.D.
+0.2
+0.3
-0.3
phage
WM_Bas09
-0.7
N.D.
+0.6
+0.5
+0.2
no phage control
Control_ECRC98_WM
-0.1
N.D.
-0.3
+1.3
-0.2
phage
WM_K30
-0.2
N.D.
+0.6
+0.3
+0.2
phage
WM_Bas31
-0.0
N.D.
+0.1
+0.6
+0.1
phage
WM_JK32
+0.3
N.D.
+0.1
+0.7
-0.0
no phage control
Control_ECRC98_WM
+0.2
N.D.
+0.5
+1.1
-0.1
phage
WM_EV240
+0.3
N.D.
+1.0
+0.8
-0.0
phage
WM_EV240
+0.2
N.D.
+0.5
+1.0
+1.2
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