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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
astB and astE overlap by 8 nucleotides
astE and spy are separated by 329 nucleotides
spy and ves are separated by 202 nucleotides
ves and cho overlap by 41 nucleotides
JDDGAC_01495: astB - N-succinylarginine dihydrolase, at 261,468 to 262,811
astB
JDDGAC_01500: astE - succinylglutamate desuccinylase, at 262,804 to 263,772
astE
JDDGAC_01505: spy - ATP-independent periplasmic protein-refolding chaperone Spy, at 264,102 to 264,587
spy
JDDGAC_01510: ves - environmental stress-induced protein Ves, at 264,790 to 265,365
ves
JDDGAC_01515: cho - excinuclease Cho, at 265,325 to 266,212
cho
Group
Condition
JDDGAC
_01495
JDDGAC
_01500
JDDGAC
_01505
JDDGAC
_01510
JDDGAC
_01515
astB
astE
spy
ves
cho
phage
WM_Bas09
-0.1
-0.0
-0.2
+0.1
-0.7
phage
WM_TP12
-0.0
-0.2
-0.6
+0.0
-0.2
phage
WM_JK45
+0.3
-0.6
-0.2
-0.1
-0.1
phage
WM_JK45
+0.3
-0.1
+0.1
-0.4
-0.3
phage
WM_JK32
+0.3
-0.3
-0.3
-0.1
+0.3
phage
WM_Bas09
+0.3
-0.0
-0.2
+0.2
-0.5
phage
WM_K30
+0.4
+0.3
-0.6
-0.1
-0.2
no phage control
Control_ECRC98_WM
+0.1
+0.6
-0.4
-0.3
-0.1
phage
WM_EV240
+0.4
+0.1
-0.7
-0.1
+0.3
phage
WM_JK32
-0.0
+0.0
+0.3
+0.2
-0.3
phage
WM_K30
+0.2
+0.3
+0.5
-0.5
-0.0
no phage control
Control_ECRC98_WM
+0.3
-0.5
+0.7
-0.2
+0.2
phage
WM_Bas31
+0.2
-0.0
+0.4
-0.1
+0.0
no phage control
Control_ECRC98_WM
+0.2
+0.3
+0.7
-0.1
-0.4
no phage control
Control_ECRC98_WM
+0.3
+0.1
+0.3
+0.1
-0.1
phage
WM_Bas31
+0.1
+0.4
+0.6
-0.3
-0.0
phage
WM_EV240
-0.3
+0.2
+0.6
+0.1
+0.2
phage
WM_TP12
+0.6
+0.6
+0.8
+0.2
-0.0
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