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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
astC and astA overlap by 4 nucleotides
astA and astD overlap by 4 nucleotides
astD and astB overlap by 4 nucleotides
astB and astE overlap by 8 nucleotides
JDDGAC_01480: astC - succinylornithine/acetylornithine transaminase, at 257,745 to 258,965
astC
JDDGAC_01485: astA - arginine N-succinyltransferase, at 258,962 to 259,996
astA
JDDGAC_01490: astD - succinylglutamate-semialdehyde dehydrogenase, at 259,993 to 261,471
astD
JDDGAC_01495: astB - N-succinylarginine dihydrolase, at 261,468 to 262,811
astB
JDDGAC_01500: astE - succinylglutamate desuccinylase, at 262,804 to 263,772
astE
Group
Condition
JDDGAC
_01480
JDDGAC
_01485
JDDGAC
_01490
JDDGAC
_01495
JDDGAC
_01500
astC
astA
astD
astB
astE
phage
WM_JK45
-0.2
+0.1
-0.2
+0.3
-0.6
phage
WM_EV240
+0.2
-0.1
-0.4
-0.3
+0.2
no phage control
Control_ECRC98_WM
-0.1
-0.3
+0.3
+0.3
-0.5
phage
WM_Bas09
+0.3
-0.1
-0.5
+0.3
-0.0
phage
WM_EV240
+0.3
-0.5
-0.1
+0.4
+0.1
phage
WM_JK32
+0.2
+0.1
-0.1
-0.0
+0.0
phage
WM_K30
-0.0
-0.2
-0.2
+0.4
+0.3
phage
WM_Bas31
-0.1
+0.2
-0.3
+0.1
+0.4
phage
WM_Bas09
+0.4
+0.1
-0.0
-0.1
-0.0
phage
WM_Bas31
+0.4
+0.1
-0.3
+0.2
-0.0
no phage control
Control_ECRC98_WM
+0.1
+0.3
-0.6
+0.2
+0.3
phage
WM_JK45
+0.3
-0.1
+0.1
+0.3
-0.1
phage
WM_TP12
+0.3
+0.2
+0.1
-0.0
-0.2
phage
WM_JK32
+0.4
+0.5
-0.2
+0.3
-0.3
no phage control
Control_ECRC98_WM
+0.2
-0.0
+0.1
+0.3
+0.1
phage
WM_K30
-0.0
+0.2
+0.1
+0.2
+0.3
no phage control
Control_ECRC98_WM
+0.2
+0.1
+0.1
+0.1
+0.6
phage
WM_TP12
+0.1
+0.4
-0.3
+0.6
+0.6
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