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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
ftnB and araF are separated by 796 nucleotides
araF and araG are separated by 69 nucleotides
araG and araH are separated by 14 nucleotides
araH and otsB are separated by 166 nucleotides
JDDGAC_00640: ftnB - non-heme ferritin-like protein, at 100,659 to 101,162
ftnB
JDDGAC_00645: araF - arabinose ABC transporter substrate-binding protein AraF, at 101,959 to 102,948
araF
JDDGAC_00650: araG - arabinose ABC transporter ATP-binding protein AraG, at 103,018 to 104,532
araG
JDDGAC_00655: araH - arabinose ABC transporter permease AraH, at 104,547 to 105,533
araH
JDDGAC_00660: otsB - trehalose-phosphatase, at 105,700 to 106,500
otsB
Group
Condition
JDDGAC
_00640
JDDGAC
_00645
JDDGAC
_00650
JDDGAC
_00655
JDDGAC
_00660
ftnB
araF
araG
araH
otsB
no phage control
Control_ECRC98_WM
+0.2
-0.6
-0.0
-0.1
-0.8
phage
WM_Bas09
-0.5
+0.0
-0.1
+0.1
-0.8
phage
WM_Bas09
-0.4
-0.5
-0.0
-0.2
+0.3
phage
WM_Bas31
-0.2
+0.1
-0.2
-0.1
-0.2
phage
WM_Bas31
-0.2
+0.2
+0.0
-0.1
-0.5
phage
WM_JK32
-0.2
-0.1
-0.0
-0.1
-0.1
phage
WM_EV240
-0.0
+0.0
-0.1
-0.1
-0.3
phage
WM_K30
-0.0
+0.3
-0.2
-0.2
-0.3
phage
WM_EV240
-0.4
+0.1
+0.2
+0.0
-0.2
phage
WM_K30
+0.0
-0.1
+0.0
+0.1
-0.3
no phage control
Control_ECRC98_WM
+0.3
-0.0
-0.2
-0.2
+0.0
phage
WM_JK32
+0.1
+0.3
-0.4
-0.2
+0.1
phage
WM_TP12
+0.5
-0.2
+0.1
-0.2
-0.2
no phage control
Control_ECRC98_WM
+0.4
+0.0
-0.1
+0.0
-0.1
phage
WM_TP12
-0.0
+0.2
+0.1
-0.0
+0.0
phage
WM_JK45
+1.0
-0.1
-0.0
-0.3
-0.2
phage
WM_JK45
+0.5
+0.1
+0.1
-0.2
+0.0
no phage control
Control_ECRC98_WM
+0.6
+0.2
-0.3
+0.1
+0.1
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