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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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500 nt
yedD and amyA are separated by 33 nucleotides
amyA and fliT are separated by 77 nucleotides
fliT and fliS overlap by 1 nucleotides
fliS and fliD are separated by 24 nucleotides
JDDGAC_00340: yedD - lipoprotein, at 58,624 to 59,037
yedD
JDDGAC_00345: amyA - alpha-amylase, at 59,071 to 60,558
amyA
JDDGAC_00350: fliT - flagella biosynthesis regulatory protein FliT, at 60,636 to 61,001
fliT
JDDGAC_00355: fliS - flagellar export chaperone FliS, at 61,001 to 61,411
fliS
JDDGAC_00360: fliD - flagellar filament capping protein FliD, at 61,436 to 62,833
fliD
Group
Condition
JDDGAC
_00340
JDDGAC
_00345
JDDGAC
_00350
JDDGAC
_00355
JDDGAC
_00360
yedD
amyA
fliT
fliS
fliD
phage
WM_EV240
N.D.
-0.4
-1.9
-0.2
-0.2
no phage control
Control_ECRC98_WM
N.D.
-0.2
-2.0
+0.2
-0.2
phage
WM_TP12
N.D.
-0.1
-1.8
+0.4
-0.0
phage
WM_Bas09
N.D.
-0.5
-1.0
+0.3
-0.4
phage
WM_EV240
N.D.
-0.1
-1.1
-0.9
+0.5
phage
WM_K30
N.D.
-0.4
-1.1
+0.3
-0.2
phage
WM_TP12
N.D.
-0.3
-0.0
-0.4
-0.2
no phage control
Control_ECRC98_WM
N.D.
-0.1
-1.1
+0.6
-0.2
no phage control
Control_ECRC98_WM
N.D.
-0.4
-0.5
+0.5
-0.1
phage
WM_K30
N.D.
-0.0
-0.6
+0.3
-0.1
phage
WM_JK45
N.D.
-0.3
-0.2
+0.1
+0.1
phage
WM_JK45
N.D.
+0.1
-0.2
+0.0
+0.0
phage
WM_Bas31
N.D.
-0.1
+0.2
+0.1
-0.2
phage
WM_JK32
N.D.
-0.1
+0.2
-0.0
-0.0
phage
WM_Bas09
N.D.
-0.1
-0.5
+0.2
+0.5
phage
WM_JK32
N.D.
-0.3
+0.3
+0.0
+0.3
no phage control
Control_ECRC98_WM
N.D.
+0.1
+0.1
-0.0
+0.3
phage
WM_Bas31
N.D.
-0.1
+0.1
+0.5
+0.2
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