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Fitness for 5 genes in
Fusobacterium nucleatum SB010
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500 nt
HUW76_10265 and HUW76_10270 are separated by 2 nucleotides
HUW76_10270 and HUW76_10275 overlap by 1 nucleotides
HUW76_10275 and HUW76_10280 are separated by 46 nucleotides
HUW76_10280 and HUW76_10285 are separated by 3 nucleotides
HUW76_10265: HUW76_10265 - thiamine phosphate synthase, at 2,149,749 to 2,150,369
_10265
HUW76_10270: HUW76_10270 - 2-iminoacetate synthase ThiH, at 2,150,372 to 2,151,502
_10270
HUW76_10275: HUW76_10275 - thiazole synthase, at 2,151,502 to 2,152,275
_10275
HUW76_10280: HUW76_10280 - sulfur carrier protein ThiS adenylyltransferase ThiF, at 2,152,322 to 2,152,957
_10280
HUW76_10285: HUW76_10285 - sulfur carrier protein ThiS, at 2,152,961 to 2,153,155
_10285
Group
Condition
HUW76
_10265
HUW76
_10270
HUW76
_10275
HUW76
_10280
HUW76
_10285
time0_primer_test
Time0_primer_test
-0.6
-0.2
-0.2
-0.1
-0.1
carbon source complex media
RCM (C)
-1.0
-0.3
-0.6
+0.0
+0.7
time0_primer_test
Time0_primer_test
-0.3
-0.2
-0.2
-0.2
-0.2
time0_primer_test
Time0_primer_test
-0.5
-0.2
-0.2
-0.1
+0.0
time0_primer_test
Time0_primer_test
-0.4
-0.1
-0.2
-0.1
-0.1
mouse
G1M3_D3
-0.6
+0.1
-0.1
-0.1
-0.1
mouse
G1M1_D4
-0.6
+0.2
+0.2
-0.2
-0.3
time0_glycerolstock
Time0_glycerolstock
-0.4
+0.0
-0.2
+0.1
-0.0
mouse
G1M3_D7
+0.1
-0.2
+0.1
-0.4
+0.2
mouse
G1M1_D9
-0.1
+0.2
+0.1
-0.2
-0.2
time0_glycerolstock
Time0_glycerolstock
-0.5
-0.1
-0.0
+0.2
+0.3
mouse
G1M1_D7
-0.1
-0.0
+0.1
-0.1
+0.1
time0_glycerolstock
Time0_glycerolstock
-0.3
-0.1
-0.0
+0.2
+0.2
time0_glycerolstock
Time0_glycerolstock
-0.2
-0.1
-0.1
+0.0
+0.3
carbon source
butyrate (C)
-0.9
-0.5
+0.0
+0.4
+1.0
mouse
G1M1_D11
+0.2
-0.0
+0.2
-0.2
+0.0
carbon source
Rhamnogalacturonan I from potato pectic fiber (C)
-0.2
-0.1
+0.1
-0.1
+0.5
mouse
G1M1_D3
+0.1
+0.1
+0.1
-0.1
-0.0
mouse
G2M5_D4
-0.4
+0.2
+0.2
-0.1
+0.4
mouse
G1M3_D4
-0.4
+0.4
+0.3
-0.2
+0.3
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