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Fitness for 5 genes in
Fusobacterium nucleatum SB010
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500 nt
HUW76_10105 and HUW76_10110 are separated by 306 nucleotides
HUW76_10110 and HUW76_10115 overlap by 4 nucleotides
HUW76_10115 and HUW76_10120 are separated by 113 nucleotides
HUW76_10120 and HUW76_10125 are separated by 252 nucleotides
HUW76_10105: HUW76_10105 - endolytic transglycosylase MltG, at 2,111,447 to 2,112,379
_10105
HUW76_10110: HUW76_10110 - tRNA lysidine(34) synthetase TilS, at 2,112,686 to 2,114,032
_10110
HUW76_10115: HUW76_10115 - ATP-dependent zinc metalloprotease FtsH, at 2,114,029 to 2,116,200
_10115
HUW76_10120: HUW76_10120 - 30S ribosomal protein S15, at 2,116,314 to 2,116,571
_10120
HUW76_10125: HUW76_10125 - YibE/F family protein, at 2,116,824 to 2,117,933
_10125
Group
Condition
HUW76
_10105
HUW76
_10110
HUW76
_10115
HUW76
_10120
HUW76
_10125
carbon source complex media
RCM (C)
-2.1
N.D.
-2.2
-5.0
-0.0
mouse
G1M1_D9
-1.1
N.D.
-0.7
-6.7
-0.0
mouse
G1M1_D3
-1.3
N.D.
-2.6
-4.3
+0.0
mouse
G1M1_D7
-1.7
N.D.
-1.3
-3.9
+0.1
mouse
G1M1_D11
-1.2
N.D.
+0.6
-6.0
+0.4
mouse
G1M3_D7
-0.8
N.D.
+2.1
-4.9
-0.0
carbon source
butyrate (C)
-0.4
N.D.
-1.4
-1.8
+0.2
mouse
G1M1_D4
-0.4
N.D.
+0.4
-2.6
-0.1
mouse
G2M5_D4
-1.6
N.D.
+1.7
-2.7
+0.1
mouse
G1M3_D4
-0.2
N.D.
+0.6
-2.0
-0.3
mouse
G1M3_D3
+0.2
N.D.
-0.3
-1.7
-0.2
time0_primer_test
Time0_primer_test
-0.3
N.D.
-0.8
+0.3
-0.1
time0_primer_test
Time0_primer_test
-0.3
N.D.
-0.5
-0.2
+0.0
time0_primer_test
Time0_primer_test
-0.3
N.D.
-0.7
+0.1
-0.0
time0_primer_test
Time0_primer_test
-0.3
N.D.
-0.9
+0.4
-0.0
carbon source
Rhamnogalacturonan I from potato pectic fiber (C)
+0.2
N.D.
+1.5
-1.6
+0.2
time0_glycerolstock
Time0_glycerolstock
-0.6
N.D.
+3.2
+0.7
-0.1
time0_glycerolstock
Time0_glycerolstock
-0.6
N.D.
+3.2
+1.0
-0.1
time0_glycerolstock
Time0_glycerolstock
-0.3
N.D.
+3.3
+0.7
-0.1
time0_glycerolstock
Time0_glycerolstock
-0.5
N.D.
+3.3
+1.2
-0.1
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