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Fitness for 5 genes in
Fusobacterium nucleatum SB010
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500 nt
HUW76_10095 and HUW76_10100 are separated by 523 nucleotides
HUW76_10100 and HUW76_10105 are separated by 9 nucleotides
HUW76_10105 and HUW76_10110 are separated by 306 nucleotides
HUW76_10110 and HUW76_10115 overlap by 4 nucleotides
HUW76_10095: HUW76_10095 - hypothetical protein, at 2,108,551 to 2,109,327
_10095
HUW76_10100: HUW76_10100 - DEAD/DEAH box helicase, at 2,109,851 to 2,111,437
_10100
HUW76_10105: HUW76_10105 - endolytic transglycosylase MltG, at 2,111,447 to 2,112,379
_10105
HUW76_10110: HUW76_10110 - tRNA lysidine(34) synthetase TilS, at 2,112,686 to 2,114,032
_10110
HUW76_10115: HUW76_10115 - ATP-dependent zinc metalloprotease FtsH, at 2,114,029 to 2,116,200
_10115
Group
Condition
HUW76
_10095
HUW76
_10100
HUW76
_10105
HUW76
_10110
HUW76
_10115
carbon source complex media
RCM (C)
+0.3
-1.4
-2.1
N.D.
-2.2
mouse
G1M1_D3
-0.2
-1.3
-1.3
N.D.
-2.6
mouse
G1M1_D7
-0.3
-1.2
-1.7
N.D.
-1.3
mouse
G1M1_D9
-0.2
-1.4
-1.1
N.D.
-0.7
mouse
G1M1_D11
-0.8
-1.5
-1.2
N.D.
+0.6
mouse
G2M5_D4
-0.7
-2.2
-1.6
N.D.
+1.7
carbon source
butyrate (C)
+0.1
+0.0
-0.4
N.D.
-1.4
time0_primer_test
Time0_primer_test
+0.0
+0.1
-0.3
N.D.
-0.9
time0_primer_test
Time0_primer_test
+0.1
+0.0
-0.3
N.D.
-0.8
time0_primer_test
Time0_primer_test
-0.0
+0.0
-0.3
N.D.
-0.7
time0_primer_test
Time0_primer_test
+0.0
+0.1
-0.3
N.D.
-0.5
mouse
G1M3_D3
-0.1
+0.0
+0.2
N.D.
-0.3
mouse
G1M3_D4
-0.4
+0.1
-0.2
N.D.
+0.6
mouse
G1M1_D4
-0.1
+0.2
-0.4
N.D.
+0.4
mouse
G1M3_D7
-0.1
+0.2
-0.8
N.D.
+2.1
carbon source
Rhamnogalacturonan I from potato pectic fiber (C)
-0.4
-0.0
+0.2
N.D.
+1.5
time0_glycerolstock
Time0_glycerolstock
-0.1
+0.1
-0.6
N.D.
+3.2
time0_glycerolstock
Time0_glycerolstock
-0.1
+0.1
-0.6
N.D.
+3.2
time0_glycerolstock
Time0_glycerolstock
-0.2
+0.0
-0.5
N.D.
+3.3
time0_glycerolstock
Time0_glycerolstock
-0.2
-0.0
-0.3
N.D.
+3.3
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