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Protein
Homologs
Fitness for 5 genes in
Fusobacterium nucleatum SB010
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500 nt
HUW76_10050 and HUW76_10055 are separated by 429 nucleotides
HUW76_10055 and HUW76_10060 are separated by 81 nucleotides
HUW76_10060 and HUW76_10065 are separated by 81 nucleotides
HUW76_10065 and HUW76_10070 are separated by 82 nucleotides
HUW76_10050: HUW76_10050 - TonB-dependent receptor, at 2,097,686 to 2,099,659
_10050
HUW76_10055: HUW76_10055 - MerR family transcriptional regulator, at 2,100,089 to 2,100,460
_10055
HUW76_10060: HUW76_10060 - SDR family NAD(P)-dependent oxidoreductase, at 2,100,542 to 2,101,324
_10060
HUW76_10065: HUW76_10065 - RidA family protein, at 2,101,406 to 2,101,783
_10065
HUW76_10070: HUW76_10070 - hypothetical protein, at 2,101,866 to 2,102,624
_10070
Group
Condition
HUW76
_10050
HUW76
_10055
HUW76
_10060
HUW76
_10065
HUW76
_10070
mouse
G1M1_D3
+0.4
-0.2
-0.3
-8.2
+0.1
mouse
G1M1_D9
-0.0
-0.4
-0.3
-6.4
+0.1
mouse
G1M1_D7
+0.2
-0.3
-0.1
-6.6
+0.2
carbon source complex media
RCM (C)
+0.3
+0.3
-0.2
-6.6
-0.2
mouse
G1M1_D11
-0.1
-1.0
-0.3
-5.1
+0.3
mouse
G1M3_D3
-0.1
-0.4
-0.2
-5.5
+0.0
mouse
G1M1_D4
-0.1
-0.2
-0.1
-5.3
+0.1
mouse
G1M3_D4
+0.1
-0.0
+0.1
-5.1
+0.3
mouse
G1M3_D7
-0.1
-0.2
-0.5
-3.7
+0.2
mouse
G2M5_D4
+0.7
+0.2
-0.4
-4.0
+0.1
carbon source
butyrate (C)
-0.0
+0.0
-0.4
-0.7
+0.2
time0_primer_test
Time0_primer_test
+0.1
-0.2
+0.0
+0.1
+0.0
time0_glycerolstock
Time0_glycerolstock
-0.0
-0.2
-0.0
+0.4
-0.0
carbon source
Rhamnogalacturonan I from potato pectic fiber (C)
+0.3
+0.0
-0.0
-0.1
+0.0
time0_primer_test
Time0_primer_test
-0.0
+0.1
+0.0
+0.2
+0.1
time0_glycerolstock
Time0_glycerolstock
+0.1
+0.1
-0.1
+0.4
-0.0
time0_primer_test
Time0_primer_test
+0.1
+0.0
-0.0
+0.3
+0.1
time0_glycerolstock
Time0_glycerolstock
-0.1
-0.0
-0.0
+0.5
+0.0
time0_primer_test
Time0_primer_test
+0.1
+0.1
+0.0
+0.3
-0.0
time0_glycerolstock
Time0_glycerolstock
+0.2
-0.1
-0.1
+0.6
-0.0
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HUW76_10060
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