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Fitness for 5 genes in
Fusobacterium nucleatum SB010
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500 nt
HUW76_09850 and HUW76_09855 are separated by 232 nucleotides
HUW76_09855 and HUW76_09860 are separated by 120 nucleotides
HUW76_09860 and HUW76_09865 overlap by 1 nucleotides
HUW76_09865 and HUW76_09870 are separated by 119 nucleotides
HUW76_09850: HUW76_09850 - tRNA pseudouridine(38-40) synthase TruA, at 2,056,817 to 2,057,554
_09850
HUW76_09855: HUW76_09855 - DHH family phosphoesterase, at 2,057,787 to 2,058,863
_09855
HUW76_09860: HUW76_09860 - Txe/YoeB family addiction module toxin, at 2,058,984 to 2,059,238
_09860
HUW76_09865: HUW76_09865 - type II toxin-antitoxin system prevent-host-death family antitoxin, at 2,059,238 to 2,059,495
_09865
HUW76_09870: HUW76_09870 - glycerophosphodiester phosphodiesterase, at 2,059,615 to 2,060,691
_09870
Group
Condition
HUW76
_09850
HUW76
_09855
HUW76
_09860
HUW76
_09865
HUW76
_09870
carbon source complex media
RCM (C)
+0.1
-1.5
+1.4
N.D.
-0.2
time0_primer_test
Time0_primer_test
+0.0
-0.3
+0.4
N.D.
-0.2
time0_primer_test
Time0_primer_test
+0.1
+0.0
+0.1
N.D.
-0.1
time0_primer_test
Time0_primer_test
-0.0
-0.1
+0.3
N.D.
-0.1
time0_primer_test
Time0_primer_test
+0.2
-0.2
+0.3
N.D.
-0.1
time0_glycerolstock
Time0_glycerolstock
-0.0
+0.5
-0.0
N.D.
-0.1
time0_glycerolstock
Time0_glycerolstock
+0.1
+0.4
+0.2
N.D.
-0.1
carbon source
Rhamnogalacturonan I from potato pectic fiber (C)
+0.3
+0.5
+0.2
N.D.
-0.0
time0_glycerolstock
Time0_glycerolstock
-0.0
+0.6
+0.6
N.D.
-0.1
time0_glycerolstock
Time0_glycerolstock
-0.1
+0.5
+0.7
N.D.
+0.0
carbon source
butyrate (C)
+0.4
+0.8
+0.9
N.D.
+0.4
mouse
G1M1_D3
+1.4
+4.4
-0.5
N.D.
+1.6
mouse
G1M1_D7
+2.4
+4.4
+0.1
N.D.
+2.2
mouse
G2M5_D4
+1.2
+8.3
-2.4
N.D.
+2.0
mouse
G1M1_D11
+3.2
+4.2
-0.2
N.D.
+2.5
mouse
G1M1_D9
+2.9
+4.1
+0.9
N.D.
+2.3
mouse
G1M3_D3
+1.8
+6.9
-0.9
N.D.
+2.4
mouse
G1M1_D4
+2.1
+7.3
-1.0
N.D.
+2.7
mouse
G1M3_D4
+2.1
+7.3
-0.5
N.D.
+2.8
mouse
G1M3_D7
+3.2
+7.9
+0.5
N.D.
+3.5
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