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Fitness for 5 genes in
Fusobacterium nucleatum SB010
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500 nt
HUW76_09700 and HUW76_09705 are separated by 62 nucleotides
HUW76_09705 and HUW76_09710 are separated by 186 nucleotides
HUW76_09710 and HUW76_09715 are separated by 26 nucleotides
HUW76_09715 and HUW76_09720 overlap by 4 nucleotides
HUW76_09700: HUW76_09700 - helix-turn-helix transcriptional regulator, at 2,031,675 to 2,032,334
_09700
HUW76_09705: HUW76_09705 - DUF3798 domain-containing protein, at 2,032,397 to 2,033,650
_09705
HUW76_09710: HUW76_09710 - RnfABCDGE type electron transport complex subunit B, at 2,033,837 to 2,034,799
_09710
HUW76_09715: HUW76_09715 - electron transport complex subunit RsxA, at 2,034,826 to 2,035,410
_09715
HUW76_09720: HUW76_09720 - electron transport complex subunit E, at 2,035,407 to 2,036,024
_09720
Group
Condition
HUW76
_09700
HUW76
_09705
HUW76
_09710
HUW76
_09715
HUW76
_09720
carbon source complex media
RCM (C)
N.D.
+0.2
-2.7
-4.2
-4.4
mouse
G1M1_D3
N.D.
+0.2
-1.9
-3.5
-3.1
mouse
G1M1_D7
N.D.
+0.1
-2.5
-2.3
-2.8
mouse
G1M1_D9
N.D.
+0.2
-1.8
-1.7
-2.2
mouse
G1M3_D3
N.D.
+0.1
-1.0
-1.2
-1.8
mouse
G1M1_D4
N.D.
-0.1
-2.0
-0.3
-1.1
mouse
G1M3_D4
N.D.
+0.1
-1.9
-0.4
-0.8
mouse
G1M1_D11
N.D.
+0.3
-2.1
-0.3
-0.8
time0_primer_test
Time0_primer_test
N.D.
-0.2
-0.1
-1.0
-0.8
time0_primer_test
Time0_primer_test
N.D.
-0.1
-0.2
-1.1
-0.8
time0_primer_test
Time0_primer_test
N.D.
-0.2
-0.2
-1.1
-0.6
carbon source
butyrate (C)
N.D.
-0.4
+0.6
-1.4
-0.3
time0_primer_test
Time0_primer_test
N.D.
-0.1
-0.2
-0.7
-0.2
mouse
G1M3_D7
N.D.
+0.3
-1.6
+1.1
+0.6
mouse
G2M5_D4
N.D.
+0.3
-0.9
+0.7
+0.2
carbon source
Rhamnogalacturonan I from potato pectic fiber (C)
N.D.
-0.3
+0.2
+0.4
+0.6
time0_glycerolstock
Time0_glycerolstock
N.D.
-0.2
+0.3
+1.4
+1.6
time0_glycerolstock
Time0_glycerolstock
N.D.
-0.2
+0.6
+1.4
+1.4
time0_glycerolstock
Time0_glycerolstock
N.D.
-0.1
+0.4
+1.4
+1.6
time0_glycerolstock
Time0_glycerolstock
N.D.
-0.0
+0.7
+1.3
+1.5
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HUW76_09710
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