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Homologs
Fitness for 5 genes in
Fusobacterium nucleatum SB010
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500 nt
HUW76_08935 and HUW76_08940 are separated by 10 nucleotides
HUW76_08940 and HUW76_08945 are separated by 11 nucleotides
HUW76_08945 and HUW76_08950 overlap by 4 nucleotides
HUW76_08950 and HUW76_08955 are separated by 148 nucleotides
HUW76_08935: HUW76_08935 - hypothetical protein, at 1,882,427 to 1,882,918
_08935
HUW76_08940: HUW76_08940 - 1-deoxy-D-xylulose-5-phosphate synthase, at 1,882,929 to 1,884,683
_08940
HUW76_08945: HUW76_08945 - MerR family transcriptional regulator, at 1,884,695 to 1,885,075
_08945
HUW76_08950: HUW76_08950 - flavodoxin, at 1,885,072 to 1,885,587
_08950
HUW76_08955: HUW76_08955 - DMT family transporter, at 1,885,736 to 1,886,611
_08955
Group
Condition
HUW76
_08935
HUW76
_08940
HUW76
_08945
HUW76
_08950
HUW76
_08955
mouse
G2M5_D4
-0.2
-0.3
-1.5
-0.7
-0.2
carbon source complex media
RCM (C)
+0.5
-0.8
-1.5
-1.0
+0.2
mouse
G1M1_D3
-0.3
-0.0
-0.6
-0.4
+0.2
mouse
G1M1_D11
-0.4
-0.3
-0.2
-0.3
+0.0
carbon source
Rhamnogalacturonan I from potato pectic fiber (C)
-0.2
-0.2
+0.0
-0.0
-0.2
mouse
G1M1_D7
-0.2
-0.1
-0.4
-0.2
+0.3
time0_primer_test
Time0_primer_test
-0.0
+0.0
-0.3
-0.1
-0.0
mouse
G1M3_D4
-0.4
+0.2
+0.1
-0.1
-0.2
mouse
G1M3_D7
-0.7
-0.0
+0.2
-0.3
+0.7
mouse
G1M1_D9
-0.2
-0.1
-0.2
-0.2
+0.5
mouse
G1M3_D3
+0.3
+0.1
-0.2
+0.1
-0.4
time0_primer_test
Time0_primer_test
+0.3
-0.0
-0.2
-0.0
-0.1
time0_primer_test
Time0_primer_test
+0.3
-0.0
-0.2
+0.0
-0.0
time0_primer_test
Time0_primer_test
+0.2
-0.0
-0.2
+0.1
+0.1
mouse
G1M1_D4
+0.4
+0.2
+0.0
+0.1
+0.1
time0_glycerolstock
Time0_glycerolstock
+0.1
+0.0
+0.2
+0.2
+0.2
time0_glycerolstock
Time0_glycerolstock
+0.2
-0.0
+0.1
+0.4
+0.2
carbon source
butyrate (C)
+1.5
-0.1
-0.8
+0.0
+0.3
time0_glycerolstock
Time0_glycerolstock
+0.5
-0.0
+0.2
+0.2
+0.1
time0_glycerolstock
Time0_glycerolstock
+0.8
-0.0
+0.2
+0.0
+0.1
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HUW76_08945
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HUW76_08950
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HUW76_08955
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