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Fitness for 5 genes in
Fusobacterium nucleatum SB010
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500 nt
HUW76_08770 and HUW76_08775 are separated by 307 nucleotides
HUW76_08775 and HUW76_08780 are separated by 3 nucleotides
HUW76_08780 and HUW76_08785 are separated by 69 nucleotides
HUW76_08785 and HUW76_08790 are separated by 10 nucleotides
HUW76_08770: HUW76_08770 - bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR, at 1,839,776 to 1,840,297
_08770
HUW76_08775: HUW76_08775 - cysteine hydrolase, at 1,840,605 to 1,841,147
_08775
HUW76_08780: HUW76_08780 - hypothetical protein, at 1,841,151 to 1,842,338
_08780
HUW76_08785: HUW76_08785 - recombination protein RecR, at 1,842,408 to 1,843,001
_08785
HUW76_08790: HUW76_08790 - DUF496 family protein, at 1,843,012 to 1,843,308
_08790
Group
Condition
HUW76
_08770
HUW76
_08775
HUW76
_08780
HUW76
_08785
HUW76
_08790
mouse
G1M1_D7
-1.8
N.D.
+0.1
-3.9
-0.6
carbon source complex media
RCM (C)
+1.1
N.D.
+0.1
-5.0
-2.4
mouse
G1M1_D3
-0.5
N.D.
+0.1
-5.2
-0.1
mouse
G1M1_D4
-1.5
N.D.
+0.1
-2.2
-0.7
mouse
G1M3_D3
-1.1
N.D.
+0.2
-2.9
-0.5
mouse
G1M1_D9
-1.1
N.D.
+0.2
-3.3
-0.0
mouse
G1M3_D4
-0.6
N.D.
-0.1
-2.1
-1.1
mouse
G2M5_D4
-1.3
N.D.
+0.3
-0.9
-0.8
mouse
G1M1_D11
+0.2
N.D.
+0.0
-2.0
+0.0
carbon source
butyrate (C)
+0.1
N.D.
+0.0
-0.2
-1.5
mouse
G1M3_D7
-0.4
N.D.
+0.3
-0.6
-0.6
time0_primer_test
Time0_primer_test
-0.3
N.D.
-0.2
-0.4
-0.1
time0_primer_test
Time0_primer_test
-0.5
N.D.
-0.1
-0.1
+0.1
carbon source
Rhamnogalacturonan I from potato pectic fiber (C)
-1.6
N.D.
+0.1
+0.9
+0.2
time0_primer_test
Time0_primer_test
-0.2
N.D.
+0.0
-0.3
+0.2
time0_primer_test
Time0_primer_test
-0.1
N.D.
+0.1
+0.2
+0.2
time0_glycerolstock
Time0_glycerolstock
-0.1
N.D.
+0.2
+0.6
+0.0
time0_glycerolstock
Time0_glycerolstock
-0.0
N.D.
+0.2
+0.7
-0.1
time0_glycerolstock
Time0_glycerolstock
+0.1
N.D.
+0.1
+0.6
-0.0
time0_glycerolstock
Time0_glycerolstock
+0.2
N.D.
+0.2
+1.0
+0.0
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HUW76_08780
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