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Cofit
Fitness for 5 genes in
Fusobacterium nucleatum SB010
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500 nt
HUW76_08725 and HUW76_08730 overlap by 11 nucleotides
HUW76_08730 and HUW76_08735 are separated by 16 nucleotides
HUW76_08735 and HUW76_08740 are separated by 8 nucleotides
HUW76_08740 and HUW76_08745 are separated by 11 nucleotides
HUW76_08725: HUW76_08725 - hypothetical protein, at 1,828,445 to 1,829,329
_08725
HUW76_08730: HUW76_08730 - orotidine-5'-phosphate decarboxylase, at 1,829,319 to 1,830,032
_08730
HUW76_08735: HUW76_08735 - hypothetical protein, at 1,830,049 to 1,830,803
_08735
HUW76_08740: HUW76_08740 - dihydroorotate dehydrogenase, at 1,830,812 to 1,831,729
_08740
HUW76_08745: HUW76_08745 - dihydroorotate dehydrogenase electron transfer subunit, at 1,831,741 to 1,832,526
_08745
Group
Condition
HUW76
_08725
HUW76
_08730
HUW76
_08735
HUW76
_08740
HUW76
_08745
mouse
G1M1_D9
-0.1
-6.0
-0.4
-6.0
-5.0
mouse
G1M1_D7
-0.0
-6.4
-0.6
-5.7
-4.7
mouse
G1M1_D4
-0.1
-5.3
-0.5
-5.2
-4.8
mouse
G1M1_D11
-0.4
-5.1
-0.2
-5.0
-4.6
mouse
G1M3_D3
-0.3
-5.5
-0.3
-4.2
-4.8
mouse
G1M3_D4
+0.3
-5.2
-0.3
-5.1
-4.7
mouse
G2M5_D4
-0.0
-4.0
-0.5
-4.0
-3.5
mouse
G1M3_D7
-0.1
-3.7
-0.3
-3.7
-3.2
mouse
G1M1_D3
-0.1
-2.8
-0.8
-2.3
-2.4
time0_primer_test
Time0_primer_test
-0.3
+0.2
-0.2
-0.1
+0.2
time0_primer_test
Time0_primer_test
-0.3
+0.1
-0.2
+0.0
+0.1
carbon source complex media
RCM (C)
-0.7
+0.5
-0.4
+0.1
+0.3
time0_primer_test
Time0_primer_test
-0.2
+0.2
-0.1
-0.0
+0.3
time0_primer_test
Time0_primer_test
-0.2
+0.2
+0.0
+0.0
+0.2
time0_glycerolstock
Time0_glycerolstock
+0.1
+0.4
-0.1
+0.1
+0.3
time0_glycerolstock
Time0_glycerolstock
+0.2
+0.1
+0.0
+0.1
+0.4
time0_glycerolstock
Time0_glycerolstock
+0.2
+0.4
+0.1
-0.0
+0.4
time0_glycerolstock
Time0_glycerolstock
+0.3
+0.2
+0.1
+0.1
+0.4
carbon source
butyrate (C)
-0.1
+0.6
-0.2
+0.2
+0.5
carbon source
Rhamnogalacturonan I from potato pectic fiber (C)
+0.1
+0.6
+0.3
-0.1
+0.4
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