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Cofit
Protein
Homologs
Fitness for 5 genes in
Fusobacterium nucleatum SB010
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500 nt
HUW76_08710 and HUW76_08715 are separated by 50 nucleotides
HUW76_08715 and HUW76_08720 overlap by 4 nucleotides
HUW76_08720 and HUW76_08725 are separated by 10 nucleotides
HUW76_08725 and HUW76_08730 overlap by 11 nucleotides
HUW76_08710: HUW76_08710 - hypothetical protein, at 1,826,796 to 1,826,993
_08710
HUW76_08715: HUW76_08715 - histidinol-phosphatase HisJ family protein, at 1,827,044 to 1,827,820
_08715
HUW76_08720: HUW76_08720 - orotate phosphoribosyltransferase, at 1,827,817 to 1,828,434
_08720
HUW76_08725: HUW76_08725 - hypothetical protein, at 1,828,445 to 1,829,329
_08725
HUW76_08730: HUW76_08730 - orotidine-5'-phosphate decarboxylase, at 1,829,319 to 1,830,032
_08730
Group
Condition
HUW76
_08710
HUW76
_08715
HUW76
_08720
HUW76
_08725
HUW76
_08730
mouse
G1M1_D7
N.D.
-0.2
-5.7
-0.0
-6.4
mouse
G1M3_D3
N.D.
-0.3
-5.8
-0.3
-5.5
mouse
G1M1_D9
N.D.
-0.0
-5.6
-0.1
-6.0
mouse
G1M1_D4
N.D.
-0.3
-5.1
-0.1
-5.3
mouse
G1M1_D11
N.D.
-0.6
-4.4
-0.4
-5.1
mouse
G1M3_D4
N.D.
+0.1
-4.9
+0.3
-5.2
mouse
G2M5_D4
N.D.
+0.1
-3.8
-0.0
-4.0
mouse
G1M3_D7
N.D.
-0.3
-3.5
-0.1
-3.7
mouse
G1M1_D3
N.D.
-0.1
-2.3
-0.1
-2.8
time0_primer_test
Time0_primer_test
N.D.
-0.4
-0.1
-0.3
+0.1
time0_primer_test
Time0_primer_test
N.D.
-0.3
+0.1
-0.2
+0.2
carbon source complex media
RCM (C)
N.D.
+0.1
-0.2
-0.7
+0.5
time0_primer_test
Time0_primer_test
N.D.
-0.2
+0.2
-0.3
+0.2
carbon source
Rhamnogalacturonan I from potato pectic fiber (C)
N.D.
-0.7
-0.1
+0.1
+0.6
time0_primer_test
Time0_primer_test
N.D.
-0.1
-0.0
-0.2
+0.2
carbon source
butyrate (C)
N.D.
-0.6
+0.3
-0.1
+0.6
time0_glycerolstock
Time0_glycerolstock
N.D.
-0.2
+0.2
+0.2
+0.1
time0_glycerolstock
Time0_glycerolstock
N.D.
-0.2
+0.2
+0.1
+0.4
time0_glycerolstock
Time0_glycerolstock
N.D.
-0.3
+0.2
+0.2
+0.4
time0_glycerolstock
Time0_glycerolstock
N.D.
+0.0
+0.1
+0.3
+0.2
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HUW76_08720
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HUW76_08725
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HUW76_08730
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