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Cofit
Protein
Homologs
Fitness for 5 genes in
Fusobacterium nucleatum SB010
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500 nt
HUW76_08460 and HUW76_08465 overlap by 14 nucleotides
HUW76_08465 and HUW76_08470 are separated by 9 nucleotides
HUW76_08470 and HUW76_08475 are separated by 114 nucleotides
HUW76_08475 and HUW76_08480 are separated by 32 nucleotides
HUW76_08460: HUW76_08460 - ABC transporter permease, at 1,773,691 to 1,774,464
_08460
HUW76_08465: HUW76_08465 - ABC transporter substrate-binding protein, at 1,774,451 to 1,775,455
_08465
HUW76_08470: HUW76_08470 - ABC transporter ATP-binding protein, at 1,775,465 to 1,776,193
_08470
HUW76_08475: HUW76_08475 - hypothetical protein, at 1,776,308 to 1,776,757
_08475
HUW76_08480: HUW76_08480 - hypothetical protein, at 1,776,790 to 1,777,746
_08480
Group
Condition
HUW76
_08460
HUW76
_08465
HUW76
_08470
HUW76
_08475
HUW76
_08480
carbon source complex media
RCM (C)
-0.2
-0.2
-0.4
-0.2
-0.3
mouse
G2M5_D4
-0.2
-0.2
-0.3
-0.1
-0.1
time0_primer_test
Time0_primer_test
-0.2
-0.2
-0.2
+0.0
-0.1
time0_primer_test
Time0_primer_test
-0.2
-0.1
-0.2
-0.0
-0.1
time0_primer_test
Time0_primer_test
-0.1
-0.1
-0.1
-0.1
-0.1
carbon source
butyrate (C)
-0.1
-0.3
-0.1
+0.1
-0.2
time0_primer_test
Time0_primer_test
-0.1
-0.1
-0.2
+0.0
-0.1
time0_glycerolstock
Time0_glycerolstock
-0.1
-0.0
-0.1
-0.1
-0.1
mouse
G1M3_D3
+0.1
-0.1
-0.1
-0.1
-0.1
time0_glycerolstock
Time0_glycerolstock
-0.0
-0.0
+0.0
-0.2
-0.1
time0_glycerolstock
Time0_glycerolstock
+0.0
-0.0
-0.2
-0.1
+0.0
mouse
G1M1_D3
-0.0
+0.0
+0.0
+0.0
-0.2
time0_glycerolstock
Time0_glycerolstock
-0.1
-0.1
-0.1
+0.0
+0.0
carbon source
Rhamnogalacturonan I from potato pectic fiber (C)
+0.0
+0.3
+0.1
-0.1
+0.2
mouse
G1M1_D4
+0.3
+0.2
+0.4
-0.2
-0.2
mouse
G1M3_D4
+0.4
+0.1
+0.4
-0.2
+0.1
mouse
G1M1_D7
+0.3
+0.4
+0.3
+0.1
-0.2
mouse
G1M1_D9
+0.4
+0.4
+0.2
+0.1
+0.2
mouse
G1M3_D7
+0.9
+0.4
+0.6
-0.2
-0.1
mouse
G1M1_D11
+0.6
+0.5
+0.6
+0.0
-0.1
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