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Fitness for 5 genes in
Fusobacterium nucleatum SB010
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500 nt
HUW76_08280 and HUW76_08285 are separated by 2 nucleotides
HUW76_08285 and HUW76_08290 are separated by 190 nucleotides
HUW76_08290 and HUW76_08295 are separated by 176 nucleotides
HUW76_08295 and HUW76_08300 are separated by 111 nucleotides
HUW76_08280: HUW76_08280 - winged helix-turn-helix transcriptional regulator, at 1,739,100 to 1,739,477
_08280
HUW76_08285: HUW76_08285 - heavy-metal-associated domain-containing protein, at 1,739,480 to 1,739,701
_08285
HUW76_08290: HUW76_08290 - cadmium-translocating P-type ATPase, at 1,739,892 to 1,741,736
_08290
HUW76_08295: HUW76_08295 - Abi family protein, at 1,741,913 to 1,742,893
_08295
HUW76_08300: HUW76_08300 - YfcC family protein, at 1,743,005 to 1,744,519
_08300
Group
Condition
HUW76
_08280
HUW76
_08285
HUW76
_08290
HUW76
_08295
HUW76
_08300
carbon source complex media
RCM (C)
-1.5
-0.7
-1.1
-0.1
-2.6
mouse
G1M1_D11
-1.6
-0.9
-0.2
+0.0
-3.3
mouse
G1M1_D9
-1.7
-0.8
-0.1
-0.1
-3.0
mouse
G1M1_D7
-1.9
-0.5
-0.2
-0.2
-2.9
mouse
G1M1_D3
-2.3
-0.7
+0.4
-0.1
-2.6
mouse
G1M3_D7
-0.7
-0.8
+0.5
-0.1
-3.8
mouse
G1M3_D4
-1.6
-0.1
+0.8
-0.1
-3.2
mouse
G1M1_D4
-1.6
-0.3
+0.8
-0.2
-2.8
mouse
G1M3_D3
-2.1
+0.5
+0.8
-0.1
-2.8
mouse
G2M5_D4
+0.9
+0.1
+0.8
+0.1
-4.8
carbon source
butyrate (C)
+0.6
-0.9
-0.3
-0.5
-0.1
time0_primer_test
Time0_primer_test
-0.2
-0.3
+0.1
-0.3
-0.1
time0_primer_test
Time0_primer_test
-0.0
-0.4
+0.1
-0.2
-0.0
time0_primer_test
Time0_primer_test
-0.1
-0.3
+0.2
-0.3
-0.0
time0_glycerolstock
Time0_glycerolstock
-0.7
-0.4
+0.4
-0.1
+0.4
carbon source
Rhamnogalacturonan I from potato pectic fiber (C)
-0.1
-0.0
+0.2
-0.1
-0.2
time0_glycerolstock
Time0_glycerolstock
-0.3
-0.2
+0.4
-0.2
+0.3
time0_primer_test
Time0_primer_test
+0.2
-0.2
+0.1
-0.1
+0.0
time0_glycerolstock
Time0_glycerolstock
-0.8
-0.0
+0.4
+0.0
+0.4
time0_glycerolstock
Time0_glycerolstock
-0.1
-0.2
+0.6
-0.0
+0.5
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HUW76_08290
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