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Fitness for 5 genes in
Fusobacterium nucleatum SB010
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500 nt
HUW76_08260 and HUW76_08265 are separated by 695 nucleotides
HUW76_08265 and HUW76_08270 are separated by 207 nucleotides
HUW76_08270 and HUW76_08275 are separated by 58 nucleotides
HUW76_08275 and HUW76_08280 are separated by 182 nucleotides
HUW76_08260: HUW76_08260 - acyl-CoA dehydrogenase family protein, at 1,730,479 to 1,732,392
_08260
HUW76_08265: HUW76_08265 - autotransporter serine protease fusolisin, at 1,733,088 to 1,736,153
_08265
HUW76_08270: HUW76_08270 - PhzF family phenazine biosynthesis protein, at 1,736,361 to 1,737,224
_08270
HUW76_08275: HUW76_08275 - AAA family ATPase, at 1,737,283 to 1,738,917
_08275
HUW76_08280: HUW76_08280 - winged helix-turn-helix transcriptional regulator, at 1,739,100 to 1,739,477
_08280
Group
Condition
HUW76
_08260
HUW76
_08265
HUW76
_08270
HUW76
_08275
HUW76
_08280
mouse
G1M1_D3
-0.7
+0.1
-0.2
-0.0
-2.3
mouse
G1M3_D3
-0.7
-0.0
-0.1
+0.1
-2.1
mouse
G1M3_D4
-0.7
+0.0
-0.2
-0.2
-1.6
mouse
G1M1_D7
-0.6
+0.1
-0.0
-0.0
-1.9
carbon source complex media
RCM (C)
-0.2
-0.1
-0.2
-0.4
-1.5
mouse
G1M1_D9
-0.8
+0.2
+0.0
-0.0
-1.7
mouse
G1M1_D4
-0.6
+0.1
+0.1
+0.1
-1.6
mouse
G1M1_D11
-0.6
+0.3
+0.2
+0.1
-1.6
mouse
G1M3_D7
-0.6
+0.1
-0.2
+0.2
-0.7
time0_glycerolstock
Time0_glycerolstock
-0.0
+0.0
-0.0
-0.1
-0.7
time0_glycerolstock
Time0_glycerolstock
-0.2
+0.1
+0.0
+0.1
-0.8
time0_primer_test
Time0_primer_test
-0.1
-0.1
-0.2
-0.2
-0.2
carbon source
Rhamnogalacturonan I from potato pectic fiber (C)
+0.1
-0.1
-0.2
-0.2
-0.1
time0_glycerolstock
Time0_glycerolstock
-0.1
+0.1
-0.0
-0.1
-0.3
time0_glycerolstock
Time0_glycerolstock
-0.1
+0.0
-0.1
-0.2
-0.1
time0_primer_test
Time0_primer_test
-0.0
-0.1
+0.0
-0.2
-0.1
time0_primer_test
Time0_primer_test
-0.0
-0.0
+0.0
-0.1
-0.0
time0_primer_test
Time0_primer_test
-0.1
-0.1
+0.0
-0.1
+0.2
carbon source
butyrate (C)
-0.0
+0.1
-0.3
-0.4
+0.6
mouse
G2M5_D4
-0.9
+0.4
-0.2
+0.1
+0.9
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