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Protein
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Fitness for 5 genes in
Fusobacterium nucleatum SB010
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500 nt
HUW76_08215 and HUW76_08220 are separated by 163 nucleotides
HUW76_08220 and HUW76_08225 are separated by 21 nucleotides
HUW76_08225 and HUW76_08230 are separated by 280 nucleotides
HUW76_08230 and HUW76_08235 are separated by 220 nucleotides
HUW76_08215: HUW76_08215 - alanine:cation symporter family protein, at 1,715,193 to 1,716,617
_08215
HUW76_08220: HUW76_08220 - M20/M25/M40 family metallo-hydrolase, at 1,716,781 to 1,717,953
_08220
HUW76_08225: HUW76_08225 - YfcC family protein, at 1,717,975 to 1,719,375
_08225
HUW76_08230: HUW76_08230 - threonine ammonia-lyase, at 1,719,656 to 1,720,870
_08230
HUW76_08235: HUW76_08235 - PLP-dependent aminotransferase family protein, at 1,721,091 to 1,722,518
_08235
Group
Condition
HUW76
_08215
HUW76
_08220
HUW76
_08225
HUW76
_08230
HUW76
_08235
mouse
G1M3_D7
-0.4
-0.4
-0.8
+1.0
-0.4
mouse
G1M3_D4
+0.0
-0.7
-0.8
+0.9
-0.2
carbon source complex media
RCM (C)
-0.1
+0.2
-0.2
-0.4
-0.1
carbon source
Rhamnogalacturonan I from potato pectic fiber (C)
-0.1
-0.0
-0.2
+0.0
-0.0
mouse
G1M3_D3
+0.1
-0.6
-0.4
+0.8
+0.2
time0_primer_test
Time0_primer_test
+0.1
+0.1
+0.0
-0.0
-0.1
time0_glycerolstock
Time0_glycerolstock
-0.2
+0.1
+0.1
+0.0
-0.0
time0_primer_test
Time0_primer_test
+0.1
+0.1
-0.0
-0.0
+0.0
time0_primer_test
Time0_primer_test
+0.1
+0.1
+0.1
+0.0
-0.1
mouse
G1M1_D4
+0.1
-0.2
-0.4
+0.8
-0.1
time0_primer_test
Time0_primer_test
+0.2
+0.1
+0.0
-0.0
-0.0
time0_glycerolstock
Time0_glycerolstock
-0.1
+0.3
+0.1
+0.1
+0.1
time0_glycerolstock
Time0_glycerolstock
-0.1
+0.4
+0.1
+0.0
-0.0
carbon source
butyrate (C)
+0.2
+0.6
-0.0
-0.2
-0.1
mouse
G1M1_D3
+0.2
-0.8
-0.3
+1.2
+0.3
time0_glycerolstock
Time0_glycerolstock
+0.0
+0.3
+0.0
+0.1
+0.0
mouse
G1M1_D7
-0.0
-0.2
-0.0
+1.3
-0.1
mouse
G2M5_D4
+0.7
-0.3
-0.5
+1.1
+0.4
mouse
G1M1_D11
-0.2
+0.2
+0.3
+1.4
-0.3
mouse
G1M1_D9
-0.3
+0.2
+0.3
+1.4
-0.0
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