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Fitness for 5 genes in
Fusobacterium nucleatum SB010
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500 nt
HUW76_08010 and HUW76_08015 are separated by 80 nucleotides
HUW76_08015 and HUW76_08020 are separated by 93 nucleotides
HUW76_08020 and HUW76_08025 are separated by 197 nucleotides
HUW76_08025 and HUW76_08030 overlap by 4 nucleotides
HUW76_08010: HUW76_08010 - pyridoxamine 5'-phosphate oxidase family protein, at 1,668,487 to 1,668,864
_08010
HUW76_08015: HUW76_08015 - WYL domain-containing protein, at 1,668,945 to 1,669,883
_08015
HUW76_08020: HUW76_08020 - transporter substrate-binding domain-containing protein, at 1,669,977 to 1,670,858
_08020
HUW76_08025: HUW76_08025 - amino acid ABC transporter ATP-binding protein, at 1,671,056 to 1,671,811
_08025
HUW76_08030: HUW76_08030 - amino acid ABC transporter permease, at 1,671,808 to 1,672,488
_08030
Group
Condition
HUW76
_08010
HUW76
_08015
HUW76
_08020
HUW76
_08025
HUW76
_08030
mouse
G1M3_D7
-0.1
-0.1
-0.4
-0.7
-0.3
mouse
G1M1_D9
-0.5
+0.1
-0.2
-0.5
-0.2
mouse
G1M1_D7
+0.0
+0.2
-0.2
-0.4
-0.8
carbon source complex media
RCM (C)
-0.1
-0.3
+0.1
-0.3
-0.5
mouse
G1M1_D3
+0.1
-0.0
-0.0
-0.3
-0.4
mouse
G2M5_D4
+0.1
+0.0
+0.1
-0.3
-0.5
mouse
G1M1_D4
+0.2
+0.1
-0.1
-0.2
-0.5
time0_primer_test
Time0_primer_test
-0.5
-0.1
-0.0
+0.1
+0.0
carbon source
butyrate (C)
-1.0
-0.4
+0.5
+0.2
+0.3
time0_glycerolstock
Time0_glycerolstock
-0.2
-0.2
-0.0
-0.1
+0.1
time0_primer_test
Time0_primer_test
-0.3
-0.1
+0.1
+0.1
-0.1
mouse
G1M3_D3
+0.4
-0.0
+0.1
-0.3
-0.5
time0_primer_test
Time0_primer_test
-0.4
-0.2
+0.2
+0.0
+0.1
mouse
G1M3_D4
+0.2
+0.2
-0.0
-0.2
-0.4
time0_glycerolstock
Time0_glycerolstock
-0.2
-0.2
+0.1
+0.0
+0.2
time0_glycerolstock
Time0_glycerolstock
-0.1
-0.1
+0.2
+0.0
-0.2
mouse
G1M1_D11
+0.5
+0.0
+0.0
-0.3
-0.3
time0_primer_test
Time0_primer_test
-0.3
-0.1
+0.1
+0.1
+0.1
time0_glycerolstock
Time0_glycerolstock
-0.0
-0.1
+0.2
+0.1
-0.0
carbon source
Rhamnogalacturonan I from potato pectic fiber (C)
+0.0
+0.1
-0.0
+0.1
-0.0
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