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Protein
Homologs
Fitness for 5 genes in
Fusobacterium nucleatum SB010
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500 nt
HUW76_07935 and HUW76_07940 are separated by 14 nucleotides
HUW76_07940 and HUW76_07945 are separated by 22 nucleotides
HUW76_07945 and HUW76_07950 overlap by 8 nucleotides
HUW76_07950 and HUW76_07955 are separated by 101 nucleotides
HUW76_07935: HUW76_07935 - LamB/YcsF family protein, at 1,651,368 to 1,652,141
_07935
HUW76_07940: HUW76_07940 - divalent metal cation transporter, at 1,652,156 to 1,653,343
_07940
HUW76_07945: HUW76_07945 - 5-oxoprolinase subunit PxpB, at 1,653,366 to 1,654,115
_07945
HUW76_07950: HUW76_07950 - biotin-dependent carboxyltransferase family protein, at 1,654,108 to 1,655,118
_07950
HUW76_07955: HUW76_07955 - 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB, at 1,655,220 to 1,656,527
_07955
Group
Condition
HUW76
_07935
HUW76
_07940
HUW76
_07945
HUW76
_07950
HUW76
_07955
mouse
G2M5_D4
-0.3
+0.2
+0.4
-0.5
-2.2
mouse
G1M1_D3
-0.5
+0.1
-0.4
-0.2
-1.2
mouse
G1M1_D7
-0.5
+0.0
-0.1
-0.3
-1.0
mouse
G1M3_D3
-0.4
+0.1
-0.4
-0.2
-0.7
mouse
G1M1_D4
-0.4
+0.2
-0.3
-0.3
-0.5
mouse
G1M1_D9
-0.3
-0.0
-0.0
-0.4
-0.3
mouse
G1M1_D11
-0.7
+0.3
-0.4
-0.3
+0.1
mouse
G1M3_D4
-0.5
-0.0
-0.1
+0.1
-0.3
carbon source
Rhamnogalacturonan I from potato pectic fiber (C)
-0.1
-0.3
+0.0
-0.2
-0.1
mouse
G1M3_D7
-0.5
+0.1
+0.1
-0.3
+0.1
time0_primer_test
Time0_primer_test
+0.1
-0.0
-0.3
-0.0
-0.0
time0_primer_test
Time0_primer_test
+0.1
-0.1
-0.1
-0.1
+0.0
time0_primer_test
Time0_primer_test
+0.2
-0.1
-0.2
-0.1
+0.1
time0_primer_test
Time0_primer_test
+0.1
-0.0
-0.1
+0.0
+0.1
carbon source complex media
RCM (C)
+0.1
+0.2
-0.2
+0.4
-0.3
time0_glycerolstock
Time0_glycerolstock
+0.0
+0.0
+0.1
-0.1
+0.2
time0_glycerolstock
Time0_glycerolstock
+0.2
+0.0
-0.2
-0.0
+0.2
time0_glycerolstock
Time0_glycerolstock
+0.1
-0.0
+0.3
-0.1
+0.2
time0_glycerolstock
Time0_glycerolstock
+0.2
+0.0
+0.1
-0.0
+0.3
carbon source
butyrate (C)
-0.0
+0.6
+0.2
+0.5
+0.8
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HUW76_07945
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