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Fitness for 5 genes in
Fusobacterium nucleatum SB010
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500 nt
HUW76_07460 and HUW76_07465 overlap by 11 nucleotides
HUW76_07465 and HUW76_07470 are separated by 8 nucleotides
HUW76_07470 and HUW76_07475 overlap by 8 nucleotides
HUW76_07475 and HUW76_07480 are separated by 9 nucleotides
HUW76_07460: HUW76_07460 - exonuclease SbcCD subunit D, at 1,555,028 to 1,556,194
_07460
HUW76_07465: HUW76_07465 - SMC family ATPase, at 1,556,184 to 1,558,948
_07465
HUW76_07470: HUW76_07470 - epoxyqueuosine reductase QueH, at 1,558,957 to 1,559,625
_07470
HUW76_07475: HUW76_07475 - hypothetical protein, at 1,559,618 to 1,560,235
_07475
HUW76_07480: HUW76_07480 - toxin-antitoxin system YwqK family antitoxin, at 1,560,245 to 1,561,234
_07480
Group
Condition
HUW76
_07460
HUW76
_07465
HUW76
_07470
HUW76
_07475
HUW76
_07480
carbon source complex media
RCM (C)
-0.4
-0.5
-0.2
+0.3
-0.1
mouse
G1M3_D7
-0.6
-0.5
-0.1
+1.1
-0.4
time0_glycerolstock
Time0_glycerolstock
+0.0
-0.1
-0.2
+0.0
-0.2
mouse
G1M1_D3
-0.2
-0.5
-0.1
+0.3
+0.0
mouse
G1M1_D9
-0.5
-0.4
-0.1
+0.5
+0.1
time0_primer_test
Time0_primer_test
-0.1
-0.2
-0.2
+0.1
+0.0
time0_glycerolstock
Time0_glycerolstock
+0.0
-0.1
-0.1
-0.1
+0.0
time0_glycerolstock
Time0_glycerolstock
-0.2
-0.2
-0.1
+0.2
+0.0
mouse
G1M1_D7
-0.3
-0.4
-0.2
+0.5
+0.1
carbon source
Rhamnogalacturonan I from potato pectic fiber (C)
-0.2
-0.2
-0.3
+0.2
+0.4
mouse
G1M1_D11
-0.3
-0.1
-0.5
+0.5
+0.3
time0_glycerolstock
Time0_glycerolstock
-0.1
-0.1
-0.1
-0.0
+0.1
time0_primer_test
Time0_primer_test
-0.1
-0.1
-0.0
+0.0
+0.1
time0_primer_test
Time0_primer_test
-0.1
+0.0
-0.1
+0.0
+0.1
time0_primer_test
Time0_primer_test
-0.0
-0.1
+0.0
-0.0
+0.0
mouse
G1M3_D3
-0.2
-0.4
-0.3
+1.0
-0.1
carbon source
butyrate (C)
+0.1
-0.4
+0.4
+0.1
-0.0
mouse
G1M3_D4
-0.4
-0.3
-0.1
+1.1
+0.0
mouse
G2M5_D4
-0.6
-0.5
+0.2
+1.2
+0.0
mouse
G1M1_D4
-0.3
-0.3
-0.1
+1.0
+0.3
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