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Fitness for 5 genes in
Fusobacterium nucleatum SB010
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500 nt
HUW76_07385 and HUW76_07390 are separated by 351 nucleotides
HUW76_07390 and HUW76_07395 overlap by 11 nucleotides
HUW76_07395 and HUW76_07400 are separated by 176 nucleotides
HUW76_07400 and HUW76_07405 are separated by 143 nucleotides
HUW76_07385: HUW76_07385 - polysaccharide deacetylase family protein, at 1,538,208 to 1,539,300
_07385
HUW76_07390: HUW76_07390 - glutamate-1-semialdehyde 2,1-aminomutase, at 1,539,652 to 1,540,956
_07390
HUW76_07395: HUW76_07395 - bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase, at 1,540,946 to 1,541,398
_07395
HUW76_07400: HUW76_07400 - preprotein translocase subunit SecG, at 1,541,575 to 1,541,799
_07400
HUW76_07405: HUW76_07405 - glycerol-3-phosphate 1-O-acyltransferase PlsY, at 1,541,943 to 1,542,527
_07405
Group
Condition
HUW76
_07385
HUW76
_07390
HUW76
_07395
HUW76
_07400
HUW76
_07405
carbon source complex media
RCM (C)
N.D.
-2.0
+0.3
-5.8
N.D.
mouse
G1M3_D4
N.D.
-0.7
-2.2
-4.0
N.D.
mouse
G1M1_D4
N.D.
-0.6
-2.2
-4.0
N.D.
mouse
G1M1_D3
N.D.
+0.0
+0.8
-7.0
N.D.
mouse
G1M1_D7
N.D.
+0.4
-0.4
-5.8
N.D.
mouse
G1M3_D3
N.D.
-0.7
+0.1
-4.7
N.D.
mouse
G1M1_D9
N.D.
+0.6
-0.1
-5.2
N.D.
mouse
G1M1_D11
N.D.
+0.2
+0.4
-3.9
N.D.
carbon source
butyrate (C)
N.D.
-0.9
-0.5
-1.5
N.D.
mouse
G1M3_D7
N.D.
+0.3
+0.7
-2.6
N.D.
mouse
G2M5_D4
N.D.
+0.8
+1.2
-2.8
N.D.
time0_primer_test
Time0_primer_test
N.D.
-0.1
-0.2
+0.0
N.D.
carbon source
Rhamnogalacturonan I from potato pectic fiber (C)
N.D.
+0.8
-1.0
-0.1
N.D.
time0_primer_test
Time0_primer_test
N.D.
+0.0
+0.3
-0.3
N.D.
time0_primer_test
Time0_primer_test
N.D.
-0.1
+0.3
+0.1
N.D.
time0_primer_test
Time0_primer_test
N.D.
-0.1
+0.6
+0.1
N.D.
time0_glycerolstock
Time0_glycerolstock
N.D.
+0.2
+0.4
+1.4
N.D.
time0_glycerolstock
Time0_glycerolstock
N.D.
+0.2
+0.1
+1.7
N.D.
time0_glycerolstock
Time0_glycerolstock
N.D.
+0.3
+0.7
+1.4
N.D.
time0_glycerolstock
Time0_glycerolstock
N.D.
+0.2
+1.7
+0.8
N.D.
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