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Cofit
Protein
Homologs
Fitness for 5 genes in
Fusobacterium nucleatum SB010
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500 nt
HUW76_06420 and HUW76_06425 are separated by 28 nucleotides
HUW76_06425 and HUW76_06430 are separated by 240 nucleotides
HUW76_06430 and HUW76_06435 are separated by 37 nucleotides
HUW76_06435 and HUW76_06440 are separated by 4 nucleotides
HUW76_06420: HUW76_06420 - fibronectin-binding domain-containing protein, at 1,321,796 to 1,323,421
_06420
HUW76_06425: HUW76_06425 - sigma-54-dependent Fis family transcriptional regulator, at 1,323,450 to 1,324,769
_06425
HUW76_06430: HUW76_06430 - citrate transporter, at 1,325,010 to 1,326,293
_06430
HUW76_06435: HUW76_06435 - DUF1446 domain-containing protein, at 1,326,331 to 1,327,683
_06435
HUW76_06440: HUW76_06440 - hypothetical protein, at 1,327,688 to 1,327,987
_06440
Group
Condition
HUW76
_06420
HUW76
_06425
HUW76
_06430
HUW76
_06435
HUW76
_06440
carbon source complex media
RCM (C)
-1.1
-0.0
+0.0
-2.0
-1.9
carbon source
butyrate (C)
+0.1
-0.3
-0.0
-0.5
-1.2
mouse
G1M1_D7
-1.1
+0.1
+0.0
-0.0
-0.2
mouse
G1M1_D9
-0.9
-0.1
+0.3
+0.2
-0.5
mouse
G1M1_D11
-1.1
+0.1
+0.3
+0.0
-0.2
time0_primer_test
Time0_primer_test
-0.2
+0.0
-0.1
-0.3
-0.2
mouse
G1M3_D7
-0.2
+0.3
-0.1
-0.6
-0.3
time0_primer_test
Time0_primer_test
-0.2
+0.1
-0.1
-0.3
-0.3
time0_glycerolstock
Time0_glycerolstock
-0.2
-0.0
+0.0
-0.2
-0.2
time0_primer_test
Time0_primer_test
-0.1
-0.0
-0.0
-0.3
-0.2
time0_glycerolstock
Time0_glycerolstock
-0.0
-0.0
-0.1
-0.2
-0.2
time0_glycerolstock
Time0_glycerolstock
-0.1
-0.0
+0.0
-0.1
-0.2
time0_glycerolstock
Time0_glycerolstock
+0.0
+0.1
-0.1
-0.2
-0.2
mouse
G2M5_D4
-0.3
+0.2
-0.1
-0.5
+0.3
mouse
G1M1_D3
-0.2
-0.0
-0.0
-0.0
-0.1
time0_primer_test
Time0_primer_test
-0.2
+0.2
+0.0
-0.2
-0.1
mouse
G1M3_D4
-0.0
-0.0
-0.0
-0.2
-0.1
mouse
G1M3_D3
+0.0
+0.1
-0.2
-0.1
-0.1
carbon source
Rhamnogalacturonan I from potato pectic fiber (C)
+0.4
+0.0
-0.1
-0.3
-0.3
mouse
G1M1_D4
-0.0
+0.4
-0.1
-0.1
+0.2
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HUW76_06430
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