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Fitness for 5 genes in
Fusobacterium nucleatum SB010
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500 nt
HUW76_05430 and HUW76_05435 are separated by 127 nucleotides
HUW76_05435 and HUW76_05440 are separated by 237 nucleotides
HUW76_05440 and HUW76_05445 overlap by 17 nucleotides
HUW76_05445 and HUW76_05450 are separated by 9 nucleotides
HUW76_05430: HUW76_05430 - Crp/Fnr family transcriptional regulator, at 1,095,091 to 1,095,777
_05430
HUW76_05435: HUW76_05435 - MATE family efflux transporter, at 1,095,905 to 1,097,272
_05435
HUW76_05440: HUW76_05440 - chorismate synthase, at 1,097,510 to 1,098,583
_05440
HUW76_05445: HUW76_05445 - 3-phosphoshikimate 1-carboxyvinyltransferase, at 1,098,567 to 1,099,832
_05445
HUW76_05450: HUW76_05450 - hypothetical protein, at 1,099,842 to 1,100,327
_05450
Group
Condition
HUW76
_05430
HUW76
_05435
HUW76
_05440
HUW76
_05445
HUW76
_05450
mouse
G1M1_D3
+0.4
-0.6
-2.7
-3.6
-6.8
mouse
G1M1_D7
+0.4
-1.0
-2.8
-3.7
-5.7
mouse
G1M1_D9
+0.5
-1.0
-2.6
-2.2
-5.2
mouse
G1M1_D11
-0.1
-0.7
-3.8
-1.7
-3.9
mouse
G2M5_D4
-0.7
-1.1
-2.7
-2.5
-2.6
mouse
G1M3_D3
-0.4
-0.8
-1.5
-1.6
-4.6
mouse
G1M3_D4
+0.2
-0.6
-2.8
-1.8
-3.9
mouse
G1M1_D4
+0.4
-0.7
-2.4
-2.1
-3.9
carbon source complex media
RCM (C)
-0.1
-0.2
-0.7
-1.2
-5.6
mouse
G1M3_D7
+0.1
-0.5
-2.0
-1.0
-2.5
carbon source
butyrate (C)
-0.8
+0.1
+0.4
+0.1
-0.7
time0_primer_test
Time0_primer_test
+0.1
-0.2
-0.0
-0.1
+0.6
time0_primer_test
Time0_primer_test
+0.2
-0.2
+0.1
+0.0
+0.4
time0_primer_test
Time0_primer_test
-0.0
-0.0
+0.1
-0.0
+0.5
carbon source
Rhamnogalacturonan I from potato pectic fiber (C)
+0.6
-0.3
+0.6
-0.4
+0.0
time0_primer_test
Time0_primer_test
+0.1
-0.0
+0.1
-0.1
+0.5
time0_glycerolstock
Time0_glycerolstock
-0.3
-0.1
+0.3
+0.3
+0.7
time0_glycerolstock
Time0_glycerolstock
-0.2
-0.1
+0.7
+0.5
+0.6
time0_glycerolstock
Time0_glycerolstock
-0.2
-0.1
+0.4
+0.6
+1.0
time0_glycerolstock
Time0_glycerolstock
-0.0
+0.0
+0.5
+0.4
+0.6
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HUW76_05440
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