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Fitness for 5 genes in
Fusobacterium nucleatum SB010
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500 nt
HUW76_04395 and HUW76_04400 overlap by 29 nucleotides
HUW76_04400 and HUW76_04405 overlap by 7 nucleotides
HUW76_04405 and HUW76_04410 are separated by 66 nucleotides
HUW76_04410 and HUW76_04415 are separated by 16 nucleotides
HUW76_04395: HUW76_04395 - bifunctional riboflavin kinase/FAD synthetase, at 888,028 to 888,987
_04395
HUW76_04400: HUW76_04400 - segregation/condensation protein A, at 888,959 to 889,636
_04400
HUW76_04405: HUW76_04405 - murein biosynthesis integral membrane protein MurJ, at 889,630 to 891,099
_04405
HUW76_04410: HUW76_04410 - hypothetical protein, at 891,166 to 891,843
_04410
HUW76_04415: HUW76_04415 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC, at 891,860 to 893,080
_04415
Group
Condition
HUW76
_04395
HUW76
_04400
HUW76
_04405
HUW76
_04410
HUW76
_04415
mouse
G1M1_D7
N.D.
-4.8
N.D.
-6.6
N.D.
mouse
G1M1_D9
N.D.
-3.8
N.D.
-6.0
N.D.
mouse
G1M1_D4
N.D.
-3.7
N.D.
-4.9
N.D.
mouse
G1M3_D4
N.D.
-3.6
N.D.
-4.8
N.D.
mouse
G1M1_D11
N.D.
-3.4
N.D.
-4.7
N.D.
mouse
G1M3_D3
N.D.
-4.3
N.D.
-3.3
N.D.
mouse
G1M1_D3
N.D.
-4.6
N.D.
-2.9
N.D.
mouse
G2M5_D4
N.D.
-2.3
N.D.
-3.6
N.D.
mouse
G1M3_D7
N.D.
-2.1
N.D.
-3.4
N.D.
carbon source complex media
RCM (C)
N.D.
-1.5
N.D.
+0.2
N.D.
time0_primer_test
Time0_primer_test
N.D.
-0.0
N.D.
+0.8
N.D.
time0_primer_test
Time0_primer_test
N.D.
-0.0
N.D.
+1.0
N.D.
time0_primer_test
Time0_primer_test
N.D.
+0.3
N.D.
+0.9
N.D.
time0_primer_test
Time0_primer_test
N.D.
-0.2
N.D.
+1.5
N.D.
carbon source
butyrate (C)
N.D.
+0.9
N.D.
+0.7
N.D.
time0_glycerolstock
Time0_glycerolstock
N.D.
+0.3
N.D.
+1.4
N.D.
time0_glycerolstock
Time0_glycerolstock
N.D.
+0.2
N.D.
+1.5
N.D.
time0_glycerolstock
Time0_glycerolstock
N.D.
+0.2
N.D.
+1.7
N.D.
time0_glycerolstock
Time0_glycerolstock
N.D.
+0.3
N.D.
+1.7
N.D.
carbon source
Rhamnogalacturonan I from potato pectic fiber (C)
N.D.
+0.9
N.D.
+1.8
N.D.
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