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Fitness for 5 genes in
Fusobacterium nucleatum SB010
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500 nt
HUW76_03720 and HUW76_03725 are separated by 16 nucleotides
HUW76_03725 and HUW76_03730 are separated by 69 nucleotides
HUW76_03730 and HUW76_03735 are separated by 262 nucleotides
HUW76_03735 and HUW76_03740 are separated by 191 nucleotides
HUW76_03720: HUW76_03720 - single-stranded DNA-binding protein, at 742,598 to 743,053
_03720
HUW76_03725: HUW76_03725 - cob(I)yrinic acid a,c-diamide adenosyltransferase, at 743,070 to 743,648
_03725
HUW76_03730: HUW76_03730 - hypothetical protein, at 743,718 to 743,936
_03730
HUW76_03735: HUW76_03735 - ATP-binding cassette domain-containing protein, at 744,199 to 745,818
_03735
HUW76_03740: HUW76_03740 - SDR family oxidoreductase, at 746,010 to 746,939
_03740
Group
Condition
HUW76
_03720
HUW76
_03725
HUW76
_03730
HUW76
_03735
HUW76
_03740
carbon source complex media
RCM (C)
N.D.
-2.7
-0.7
-0.9
+0.1
carbon source
butyrate (C)
N.D.
-1.1
-0.8
-0.3
+0.2
time0_primer_test
Time0_primer_test
N.D.
-0.0
-0.1
-0.0
+0.2
time0_primer_test
Time0_primer_test
N.D.
-0.2
-0.1
+0.2
+0.2
time0_glycerolstock
Time0_glycerolstock
N.D.
+0.3
-0.1
-0.1
+0.0
time0_primer_test
Time0_primer_test
N.D.
-0.2
+0.1
-0.0
+0.2
time0_primer_test
Time0_primer_test
N.D.
-0.1
-0.1
+0.1
+0.2
time0_glycerolstock
Time0_glycerolstock
N.D.
+0.3
-0.2
-0.0
+0.1
time0_glycerolstock
Time0_glycerolstock
N.D.
+0.2
-0.0
-0.1
+0.1
time0_glycerolstock
Time0_glycerolstock
N.D.
+0.2
+0.2
+0.0
+0.2
carbon source
Rhamnogalacturonan I from potato pectic fiber (C)
N.D.
-0.5
+0.1
+1.0
+0.0
mouse
G1M1_D9
N.D.
+0.1
+0.4
+1.2
+0.0
mouse
G1M1_D11
N.D.
+0.0
+0.6
+1.4
+0.5
mouse
G1M1_D7
N.D.
-0.1
+0.9
+1.3
+0.3
mouse
G1M1_D3
N.D.
-0.2
+1.2
+1.4
+0.3
mouse
G2M5_D4
N.D.
-0.5
+0.7
+2.5
+0.6
mouse
G1M3_D3
N.D.
-0.3
+1.1
+3.1
+0.2
mouse
G1M3_D7
N.D.
-0.5
+1.3
+3.2
+0.3
mouse
G1M3_D4
N.D.
-0.5
+1.2
+3.4
+0.3
mouse
G1M1_D4
N.D.
-0.5
+1.1
+3.5
+0.7
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HUW76_03730
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