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Fitness for 5 genes in
Fusobacterium nucleatum SB010
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500 nt
HUW76_02660 and HUW76_02665 are separated by 4 nucleotides
HUW76_02665 and HUW76_02670 are separated by 250 nucleotides
HUW76_02670 and HUW76_02675 are separated by 14 nucleotides
HUW76_02675 and HUW76_02680 are separated by 18 nucleotides
HUW76_02660: HUW76_02660 - anaerobic ribonucleoside-triphosphate reductase activating protein, at 544,060 to 544,566
_02660
HUW76_02665: HUW76_02665 - anaerobic ribonucleoside-triphosphate reductase, at 544,571 to 546,757
_02665
HUW76_02670: HUW76_02670 - ABC transporter ATP-binding protein, at 547,008 to 548,078
_02670
HUW76_02675: HUW76_02675 - iron ABC transporter permease, at 548,093 to 549,775
_02675
HUW76_02680: HUW76_02680 - ABC transporter substrate-binding protein, at 549,794 to 550,849
_02680
Group
Condition
HUW76
_02660
HUW76
_02665
HUW76
_02670
HUW76
_02675
HUW76
_02680
carbon source complex media
RCM (C)
N.D.
-2.5
-0.4
-0.0
+0.0
time0_primer_test
Time0_primer_test
N.D.
-1.6
-0.2
-0.1
-0.3
carbon source
butyrate (C)
N.D.
-0.9
-0.6
-0.2
+0.0
time0_primer_test
Time0_primer_test
N.D.
-1.2
-0.1
-0.0
-0.3
time0_primer_test
Time0_primer_test
N.D.
-1.1
-0.1
-0.1
+0.0
time0_primer_test
Time0_primer_test
N.D.
-1.0
-0.1
-0.1
-0.1
mouse
G1M1_D3
N.D.
-2.3
+0.4
+0.4
+0.4
mouse
G1M1_D7
N.D.
-1.0
+0.5
+0.3
+0.4
mouse
G1M3_D3
N.D.
+0.1
+0.1
+0.0
+0.1
mouse
G1M1_D9
N.D.
-0.4
+0.4
+0.3
+0.3
mouse
G1M1_D4
N.D.
+0.8
+0.2
-0.0
+0.1
mouse
G1M3_D4
N.D.
+0.9
-0.1
+0.1
+0.3
carbon source
Rhamnogalacturonan I from potato pectic fiber (C)
N.D.
+1.5
-0.1
+0.0
-0.1
mouse
G1M1_D11
N.D.
+1.0
+0.2
+0.2
+0.4
time0_glycerolstock
Time0_glycerolstock
N.D.
+3.2
-0.1
-0.1
-0.0
time0_glycerolstock
Time0_glycerolstock
N.D.
+3.3
-0.1
-0.1
-0.1
time0_glycerolstock
Time0_glycerolstock
N.D.
+3.3
+0.0
-0.1
-0.1
time0_glycerolstock
Time0_glycerolstock
N.D.
+3.3
-0.0
-0.0
-0.1
mouse
G1M3_D7
N.D.
+2.5
+0.3
+0.2
+0.5
mouse
G2M5_D4
N.D.
+2.1
+0.9
+0.7
+0.9
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