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Protein
Homologs
Fitness for 5 genes in
Fusobacterium nucleatum SB010
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500 nt
HUW76_02160 and HUW76_02165 are separated by 11 nucleotides
HUW76_02165 and HUW76_02170 are separated by 14 nucleotides
HUW76_02170 and HUW76_02175 are separated by 233 nucleotides
HUW76_02175 and HUW76_02180 are separated by 164 nucleotides
HUW76_02160: HUW76_02160 - ShlB/FhaC/HecB family hemolysin secretion/activation protein, at 429,249 to 430,853
_02160
HUW76_02165: HUW76_02165 - hemagglutinin repeat-containing protein, at 430,865 to 439,496
_02165
HUW76_02170: HUW76_02170 - hypothetical protein, at 439,511 to 440,662
_02170
HUW76_02175: HUW76_02175 - helicase, at 440,896 to 441,618
_02175
HUW76_02180: HUW76_02180 - hypothetical protein, at 441,783 to 441,953
_02180
Group
Condition
HUW76
_02160
HUW76
_02165
HUW76
_02170
HUW76
_02175
HUW76
_02180
mouse
G1M1_D11
+0.1
+0.0
-3.7
-0.7
-1.7
mouse
G1M1_D9
+0.4
-0.0
-4.8
-0.4
+0.3
mouse
G1M3_D3
+0.2
+0.0
-4.1
-0.7
+0.3
mouse
G1M1_D7
+0.3
-0.0
-4.3
-0.2
+0.2
mouse
G1M3_D4
+0.4
+0.1
-2.8
-0.2
-0.3
mouse
G1M1_D4
+0.5
+0.0
-2.7
-0.2
-0.0
mouse
G2M5_D4
+0.5
-0.0
-2.3
+0.2
-0.2
mouse
G1M1_D3
+0.2
-0.0
-2.1
-0.4
+0.6
mouse
G1M3_D7
+0.6
+0.2
-2.2
+0.1
-0.3
carbon source complex media
RCM (C)
+0.4
+0.0
-2.2
+0.4
+1.0
carbon source
Rhamnogalacturonan I from potato pectic fiber (C)
-0.2
-0.0
+0.7
+0.1
-0.6
carbon source
butyrate (C)
+0.7
+0.1
-0.6
+0.2
-0.1
time0_primer_test
Time0_primer_test
+0.2
+0.0
+0.8
+0.2
-0.3
time0_primer_test
Time0_primer_test
+0.1
+0.0
+0.9
+0.1
+0.1
time0_primer_test
Time0_primer_test
+0.2
-0.0
+1.0
+0.2
+0.0
time0_primer_test
Time0_primer_test
+0.1
+0.0
+0.8
+0.1
+0.4
time0_glycerolstock
Time0_glycerolstock
+0.0
+0.0
+1.7
+0.1
+0.1
time0_glycerolstock
Time0_glycerolstock
+0.1
+0.0
+1.9
+0.0
-0.0
time0_glycerolstock
Time0_glycerolstock
+0.2
+0.0
+1.9
+0.1
+0.8
time0_glycerolstock
Time0_glycerolstock
+0.1
+0.0
+1.8
+0.2
+0.8
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