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Fitness for 5 genes in
Fusobacterium nucleatum SB010
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500 nt
HUW76_02105 and HUW76_02110 are separated by 11 nucleotides
HUW76_02110 and HUW76_02115 are separated by 268 nucleotides
HUW76_02115 and HUW76_02120 are separated by 54 nucleotides
HUW76_02120 and HUW76_02125 are separated by 129 nucleotides
HUW76_02105: HUW76_02105 - 50S ribosomal protein L9, at 417,407 to 417,856
_02105
HUW76_02110: HUW76_02110 - replicative DNA helicase, at 417,868 to 419,208
_02110
HUW76_02115: HUW76_02115 - U32 family peptidase, at 419,477 to 420,700
_02115
HUW76_02120: HUW76_02120 - hypothetical protein, at 420,755 to 421,210
_02120
HUW76_02125: HUW76_02125 - putative manganese-dependent inorganic diphosphatase, at 421,340 to 422,957
_02125
Group
Condition
HUW76
_02105
HUW76
_02110
HUW76
_02115
HUW76
_02120
HUW76
_02125
mouse
G2M5_D4
-4.6
N.D.
-1.6
-0.2
-0.0
mouse
G1M1_D7
-5.9
N.D.
+1.6
-0.1
+0.2
mouse
G1M1_D3
-3.5
N.D.
-0.3
-0.0
+0.0
mouse
G1M3_D4
-4.7
N.D.
+1.8
-0.4
-0.1
mouse
G1M1_D9
-5.8
N.D.
+3.1
-0.4
+0.2
carbon source complex media
RCM (C)
-1.3
N.D.
-0.5
-0.1
-0.4
mouse
G1M1_D4
-4.4
N.D.
+1.9
+0.5
-0.2
mouse
G1M1_D11
-5.7
N.D.
+4.1
-0.1
+0.5
mouse
G1M3_D3
-2.1
N.D.
+1.2
+0.1
-0.0
carbon source
butyrate (C)
-0.7
N.D.
+0.5
+0.1
-0.4
time0_primer_test
Time0_primer_test
-0.2
N.D.
+0.1
-0.1
-0.2
time0_primer_test
Time0_primer_test
-0.1
N.D.
+0.1
-0.2
-0.2
time0_primer_test
Time0_primer_test
-0.1
N.D.
+0.1
-0.2
-0.2
time0_primer_test
Time0_primer_test
-0.2
N.D.
+0.2
-0.1
-0.1
time0_glycerolstock
Time0_glycerolstock
-0.1
N.D.
+0.4
-0.0
-0.2
mouse
G1M3_D7
-3.4
N.D.
+3.6
-0.1
+0.0
time0_glycerolstock
Time0_glycerolstock
+0.0
N.D.
+0.4
-0.1
-0.2
time0_glycerolstock
Time0_glycerolstock
+0.0
N.D.
+0.5
-0.1
-0.1
time0_glycerolstock
Time0_glycerolstock
-0.0
N.D.
+0.3
+0.1
-0.1
carbon source
Rhamnogalacturonan I from potato pectic fiber (C)
+0.0
N.D.
+0.7
-0.0
+0.1
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