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Fitness for 5 genes in
Fusobacterium nucleatum SB010
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500 nt
HUW76_02095 and HUW76_02100 are separated by 13 nucleotides
HUW76_02100 and HUW76_02105 are separated by 16 nucleotides
HUW76_02105 and HUW76_02110 are separated by 11 nucleotides
HUW76_02110 and HUW76_02115 are separated by 268 nucleotides
HUW76_02095: HUW76_02095 - DNA polymerase III subunit gamma/tau, at 415,098 to 416,546
_02095
HUW76_02100: HUW76_02100 - hypothetical protein, at 416,560 to 417,390
_02100
HUW76_02105: HUW76_02105 - 50S ribosomal protein L9, at 417,407 to 417,856
_02105
HUW76_02110: HUW76_02110 - replicative DNA helicase, at 417,868 to 419,208
_02110
HUW76_02115: HUW76_02115 - U32 family peptidase, at 419,477 to 420,700
_02115
Group
Condition
HUW76
_02095
HUW76
_02100
HUW76
_02105
HUW76
_02110
HUW76
_02115
mouse
G2M5_D4
N.D.
-0.8
-4.6
N.D.
-1.6
mouse
G1M1_D7
N.D.
-1.4
-5.9
N.D.
+1.6
mouse
G1M1_D3
N.D.
-0.7
-3.5
N.D.
-0.3
mouse
G1M1_D9
N.D.
-1.6
-5.8
N.D.
+3.1
mouse
G1M3_D4
N.D.
-1.2
-4.7
N.D.
+1.8
mouse
G1M1_D4
N.D.
-1.1
-4.4
N.D.
+1.9
mouse
G1M1_D11
N.D.
-1.6
-5.7
N.D.
+4.1
carbon source complex media
RCM (C)
N.D.
-1.0
-1.3
N.D.
-0.5
mouse
G1M3_D3
N.D.
-0.8
-2.1
N.D.
+1.2
mouse
G1M3_D7
N.D.
-1.1
-3.4
N.D.
+3.6
carbon source
butyrate (C)
N.D.
-0.3
-0.7
N.D.
+0.5
time0_primer_test
Time0_primer_test
N.D.
-0.1
-0.2
N.D.
+0.1
time0_primer_test
Time0_primer_test
N.D.
-0.1
-0.1
N.D.
+0.1
time0_primer_test
Time0_primer_test
N.D.
-0.0
-0.2
N.D.
+0.2
time0_primer_test
Time0_primer_test
N.D.
-0.0
-0.1
N.D.
+0.1
time0_glycerolstock
Time0_glycerolstock
N.D.
-0.0
-0.0
N.D.
+0.3
time0_glycerolstock
Time0_glycerolstock
N.D.
+0.1
-0.1
N.D.
+0.4
time0_glycerolstock
Time0_glycerolstock
N.D.
-0.1
+0.0
N.D.
+0.4
time0_glycerolstock
Time0_glycerolstock
N.D.
+0.1
+0.0
N.D.
+0.5
carbon source
Rhamnogalacturonan I from potato pectic fiber (C)
N.D.
-0.2
+0.0
N.D.
+0.7
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