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Protein
Homologs
Fitness for 5 genes in
Fusobacterium nucleatum SB010
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500 nt
HUW76_02065 and HUW76_02070 are separated by 210 nucleotides
HUW76_02070 and HUW76_02075 are separated by 29 nucleotides
HUW76_02075 and HUW76_02080 are separated by 10 nucleotides
HUW76_02080 and HUW76_02085 are separated by 5 nucleotides
HUW76_02065: HUW76_02065 - tetratricopeptide repeat protein, at 408,354 to 411,164
_02065
HUW76_02070: HUW76_02070 - hypothetical protein, at 411,375 to 411,752
_02070
HUW76_02075: HUW76_02075 - MotA/TolQ/ExbB proton channel family protein, at 411,782 to 412,393
_02075
HUW76_02080: HUW76_02080 - biopolymer transporter ExbD, at 412,404 to 412,847
_02080
HUW76_02085: HUW76_02085 - energy transducer TonB, at 412,853 to 413,683
_02085
Group
Condition
HUW76
_02065
HUW76
_02070
HUW76
_02075
HUW76
_02080
HUW76
_02085
mouse
G1M1_D7
-6.5
-6.8
-6.8
-5.0
-6.9
mouse
G1M1_D9
-6.1
-6.3
-6.2
-4.5
-6.4
mouse
G1M1_D3
-5.3
-6.1
-6.5
-4.4
-5.3
mouse
G1M3_D3
-4.7
-5.4
-5.3
-3.5
-5.6
mouse
G1M1_D4
-4.8
-5.1
-5.0
-3.2
-5.2
mouse
G1M1_D11
-4.8
-5.0
-4.9
-3.1
-5.1
mouse
G1M3_D4
-4.3
-5.0
-4.0
-3.1
-4.6
mouse
G2M5_D4
-3.6
-3.9
-3.8
-2.0
-4.0
mouse
G1M3_D7
-3.3
-3.5
-3.4
-1.6
-3.6
carbon source complex media
RCM (C)
-2.3
-2.7
-2.5
-2.8
-3.1
carbon source
butyrate (C)
-0.4
-0.3
-0.7
-1.7
-0.7
time0_primer_test
Time0_primer_test
-0.3
-0.4
-0.5
-0.3
-0.5
time0_primer_test
Time0_primer_test
-0.2
-0.4
-0.5
-0.4
-0.4
time0_primer_test
Time0_primer_test
-0.2
-0.1
-0.4
-0.2
-0.5
time0_primer_test
Time0_primer_test
-0.2
-0.2
-0.6
-0.0
-0.4
carbon source
Rhamnogalacturonan I from potato pectic fiber (C)
+0.2
+0.6
+0.0
+0.7
+0.2
time0_glycerolstock
Time0_glycerolstock
+0.3
+0.5
+0.3
+0.3
+0.4
time0_glycerolstock
Time0_glycerolstock
+0.3
+0.5
+0.5
+0.4
+0.3
time0_glycerolstock
Time0_glycerolstock
+0.4
+0.6
+0.2
+0.5
+0.5
time0_glycerolstock
Time0_glycerolstock
+0.5
+0.6
+0.5
+0.6
+0.5
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HUW76_02075
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