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Cofit
Protein
Homologs
Fitness for 5 genes in
Fusobacterium nucleatum SB010
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500 nt
HUW76_02045 and HUW76_02050 are separated by 5 nucleotides
HUW76_02050 and HUW76_02055 are separated by 11 nucleotides
HUW76_02055 and HUW76_02060 are separated by 355 nucleotides
HUW76_02060 and HUW76_02065 are separated by 9 nucleotides
HUW76_02045: HUW76_02045 - response regulator, at 404,101 to 405,972
_02045
HUW76_02050: HUW76_02050 - response regulator transcription factor, at 405,978 to 406,649
_02050
HUW76_02055: HUW76_02055 - PocR ligand-binding domain-containing protein, at 406,661 to 407,458
_02055
HUW76_02060: HUW76_02060 - DUF116 domain-containing protein, at 407,814 to 408,344
_02060
HUW76_02065: HUW76_02065 - tetratricopeptide repeat protein, at 408,354 to 411,164
_02065
Group
Condition
HUW76
_02045
HUW76
_02050
HUW76
_02055
HUW76
_02060
HUW76
_02065
carbon source complex media
RCM (C)
-0.0
-0.2
-0.5
-1.2
-2.3
mouse
G1M3_D4
+0.4
+0.4
+0.4
-1.1
-4.3
mouse
G1M1_D4
+0.5
+0.4
+0.7
-0.6
-4.8
mouse
G1M3_D7
+0.3
+0.5
+0.1
-0.6
-3.3
mouse
G1M3_D3
+0.5
+0.7
+0.8
+0.1
-4.7
mouse
G1M1_D9
+2.2
+2.4
+2.3
-3.0
-6.1
mouse
G1M1_D7
+2.3
+2.5
+2.4
-2.6
-6.5
mouse
G1M1_D11
+2.0
+2.0
+2.2
-1.8
-4.8
carbon source
butyrate (C)
+0.3
+0.6
-0.2
-0.4
-0.4
carbon source
Rhamnogalacturonan I from potato pectic fiber (C)
-0.2
-0.4
-0.3
+0.5
+0.2
time0_glycerolstock
Time0_glycerolstock
-0.2
-0.1
-0.3
+0.2
+0.4
time0_glycerolstock
Time0_glycerolstock
-0.3
+0.1
-0.4
+0.2
+0.3
time0_glycerolstock
Time0_glycerolstock
-0.2
+0.3
-0.3
+0.2
+0.5
time0_glycerolstock
Time0_glycerolstock
-0.3
+0.2
-0.2
+0.6
+0.3
time0_primer_test
Time0_primer_test
+0.4
+0.6
+0.4
+0.1
-0.3
time0_primer_test
Time0_primer_test
+0.4
+0.6
+0.3
+0.2
-0.2
time0_primer_test
Time0_primer_test
+0.5
+0.6
+0.4
+0.1
-0.2
time0_primer_test
Time0_primer_test
+0.5
+0.7
+0.4
+0.2
-0.2
mouse
G1M1_D3
+2.6
+2.7
+2.8
-0.3
-5.3
mouse
G2M5_D4
+3.9
+4.3
+4.4
-2.9
-3.6
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HUW76_02055
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