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Fitness for 5 genes in
Fusobacterium nucleatum SB010
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500 nt
HUW76_01920 and HUW76_01925 are separated by 109 nucleotides
HUW76_01925 and HUW76_01930 are separated by 166 nucleotides
HUW76_01930 and HUW76_01935 are separated by 19 nucleotides
HUW76_01935 and HUW76_01940 are separated by 31 nucleotides
HUW76_01920: HUW76_01920 - SDR family oxidoreductase, at 380,679 to 381,452
_01920
HUW76_01925: HUW76_01925 - hypothetical protein, at 381,562 to 382,455
_01925
HUW76_01930: HUW76_01930 - DeoR/GlpR transcriptional regulator, at 382,622 to 383,389
_01930
HUW76_01935: HUW76_01935 - four-carbon acid sugar kinase family protein, at 383,409 to 384,686
_01935
HUW76_01940: HUW76_01940 - 4-hydroxythreonine-4-phosphate dehydrogenase PdxA, at 384,718 to 385,716
_01940
Group
Condition
HUW76
_01920
HUW76
_01925
HUW76
_01930
HUW76
_01935
HUW76
_01940
carbon source complex media
RCM (C)
+0.3
-0.6
-2.3
-0.8
-1.4
mouse
G1M1_D9
-0.3
-0.2
-2.2
-0.4
-0.4
mouse
G1M1_D11
-0.4
-0.1
-2.5
-0.2
+0.0
mouse
G1M1_D7
-0.3
-0.2
-1.4
-0.3
-0.4
mouse
G2M5_D4
-0.6
-0.1
-1.0
-0.2
-0.3
mouse
G1M1_D3
-0.4
-0.0
-0.8
-0.4
-0.2
mouse
G1M1_D4
-0.2
-0.2
-1.1
-0.4
+0.1
mouse
G1M3_D4
-0.1
-0.1
-1.0
-0.5
-0.1
mouse
G1M3_D3
-0.1
-0.3
-0.4
-0.5
-0.1
mouse
G1M3_D7
-0.5
+0.3
-0.6
-0.3
-0.1
time0_primer_test
Time0_primer_test
-0.1
-0.4
+0.1
-0.2
-0.0
carbon source
butyrate (C)
+0.1
-0.1
-0.1
-0.3
-0.1
time0_primer_test
Time0_primer_test
-0.1
-0.3
+0.1
-0.1
+0.0
time0_primer_test
Time0_primer_test
-0.1
-0.2
+0.0
-0.2
-0.0
time0_glycerolstock
Time0_glycerolstock
-0.0
-0.3
+0.1
-0.1
+0.0
time0_primer_test
Time0_primer_test
+0.0
-0.1
-0.0
-0.1
-0.0
time0_glycerolstock
Time0_glycerolstock
+0.0
+0.0
+0.2
-0.1
+0.1
time0_glycerolstock
Time0_glycerolstock
+0.0
-0.2
+0.5
-0.1
+0.1
carbon source
Rhamnogalacturonan I from potato pectic fiber (C)
+0.1
-0.1
+0.4
+0.1
-0.1
time0_glycerolstock
Time0_glycerolstock
+0.1
-0.0
+0.4
-0.0
+0.1
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