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Fitness for 5 genes in
Fusobacterium nucleatum SB010
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500 nt
HUW76_01870 and HUW76_01875 are separated by 158 nucleotides
HUW76_01875 and HUW76_01880 are separated by 111 nucleotides
HUW76_01880 and HUW76_01885 are separated by 62 nucleotides
HUW76_01885 and HUW76_01890 overlap by 4 nucleotides
HUW76_01870: HUW76_01870 - methylaspartate mutase subunit S, at 370,824 to 371,234
_01870
HUW76_01875: HUW76_01875 - hypothetical protein, at 371,393 to 371,818
_01875
HUW76_01880: HUW76_01880 - ribonuclease PH, at 371,930 to 373,234
_01880
HUW76_01885: HUW76_01885 - 3-oxoacyl-ACP synthase, at 373,297 to 374,226
_01885
HUW76_01890: HUW76_01890 - CoF synthetase, at 374,223 to 375,497
_01890
Group
Condition
HUW76
_01870
HUW76
_01875
HUW76
_01880
HUW76
_01885
HUW76
_01890
carbon source complex media
RCM (C)
N.D.
+0.0
-2.1
+0.1
+0.5
carbon source
butyrate (C)
N.D.
-0.6
-0.2
-0.0
-0.3
mouse
G1M1_D7
N.D.
-0.1
-0.5
-0.0
-0.1
mouse
G1M1_D3
N.D.
-0.0
-0.7
+0.1
+0.0
mouse
G1M1_D9
N.D.
+0.2
-0.6
-0.0
+0.1
time0_glycerolstock
Time0_glycerolstock
N.D.
-0.2
-0.1
+0.0
-0.1
time0_glycerolstock
Time0_glycerolstock
N.D.
-0.3
-0.1
-0.0
-0.0
time0_primer_test
Time0_primer_test
N.D.
-0.2
-0.1
-0.0
-0.1
mouse
G1M3_D3
N.D.
-0.1
-0.2
+0.1
-0.2
time0_primer_test
Time0_primer_test
N.D.
-0.1
-0.1
+0.0
-0.1
time0_glycerolstock
Time0_glycerolstock
N.D.
-0.2
-0.1
+0.1
-0.0
time0_glycerolstock
Time0_glycerolstock
N.D.
-0.4
+0.1
+0.1
+0.0
mouse
G1M1_D11
N.D.
-0.1
-0.4
+0.2
+0.1
time0_primer_test
Time0_primer_test
N.D.
+0.0
-0.1
+0.0
-0.1
mouse
G2M5_D4
N.D.
+0.2
-0.3
+0.2
-0.2
time0_primer_test
Time0_primer_test
N.D.
-0.1
-0.1
+0.1
-0.0
carbon source
Rhamnogalacturonan I from potato pectic fiber (C)
N.D.
+0.2
-0.0
-0.2
-0.0
mouse
G1M1_D4
N.D.
+0.1
-0.0
-0.0
-0.0
mouse
G1M3_D7
N.D.
+0.4
-0.2
+0.1
+0.0
mouse
G1M3_D4
N.D.
+0.3
-0.1
+0.1
+0.0
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