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Fitness for 5 genes in
Fusobacterium nucleatum SB010
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500 nt
HUW76_01450 and HUW76_01455 overlap by 8 nucleotides
HUW76_01455 and HUW76_01460 are separated by 381 nucleotides
HUW76_01460 and HUW76_01465 are separated by 364 nucleotides
HUW76_01465 and HUW76_01470 are separated by 70 nucleotides
HUW76_01450: HUW76_01450 - transcriptional regulator, at 286,328 to 286,699
_01450
HUW76_01455: HUW76_01455 - addiction module toxin RelE, at 286,692 to 287,027
_01455
HUW76_01460: HUW76_01460 - YebC/PmpR family DNA-binding transcriptional regulator, at 287,409 to 288,158
_01460
HUW76_01465: HUW76_01465 - ATP-dependent DNA helicase RecG, at 288,523 to 290,592
_01465
HUW76_01470: HUW76_01470 - proline--tRNA ligase, at 290,663 to 292,366
_01470
Group
Condition
HUW76
_01450
HUW76
_01455
HUW76
_01460
HUW76
_01465
HUW76
_01470
mouse
G1M1_D3
-1.6
-0.4
-5.5
-5.3
N.D.
mouse
G1M1_D7
-1.3
-0.0
-6.0
-4.1
N.D.
mouse
G1M1_D9
-1.0
-0.2
-5.7
-3.6
N.D.
mouse
G1M1_D11
-1.9
-0.2
-4.4
-2.3
N.D.
mouse
G1M3_D3
-1.5
-0.7
-3.0
-3.0
N.D.
mouse
G1M3_D4
-1.4
-0.2
-4.5
-2.1
N.D.
mouse
G1M1_D4
-0.6
-0.3
-4.6
-2.2
N.D.
mouse
G1M3_D7
-1.6
+0.1
-3.0
-0.8
N.D.
carbon source complex media
RCM (C)
+0.5
+0.3
-1.9
-4.0
N.D.
mouse
G2M5_D4
+0.0
-0.5
-3.3
-1.1
N.D.
carbon source
butyrate (C)
+0.2
-0.2
-0.7
-0.6
N.D.
time0_primer_test
Time0_primer_test
-0.2
+0.1
-0.4
+0.3
N.D.
time0_primer_test
Time0_primer_test
+0.1
-0.0
-0.2
+0.3
N.D.
carbon source
Rhamnogalacturonan I from potato pectic fiber (C)
-0.3
-0.1
-0.0
+0.8
N.D.
time0_primer_test
Time0_primer_test
+0.1
+0.1
-0.1
+0.3
N.D.
time0_primer_test
Time0_primer_test
+0.4
+0.0
-0.1
+0.3
N.D.
time0_glycerolstock
Time0_glycerolstock
+0.3
+0.2
+0.1
+0.9
N.D.
time0_glycerolstock
Time0_glycerolstock
+0.5
+0.2
+0.0
+0.9
N.D.
time0_glycerolstock
Time0_glycerolstock
+0.6
+0.2
+0.0
+0.9
N.D.
time0_glycerolstock
Time0_glycerolstock
+0.3
+0.3
+0.2
+1.0
N.D.
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