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Fitness for 5 genes in
Fusobacterium nucleatum SB010
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500 nt
HUW76_00780 and HUW76_00785 are separated by 457 nucleotides
HUW76_00785 and HUW76_00790 are separated by 16 nucleotides
HUW76_00790 and HUW76_00795 are separated by 1 nucleotides
HUW76_00795 and HUW76_00800 are separated by 130 nucleotides
HUW76_00780: HUW76_00780 - cob(I)yrinic acid a,c-diamide adenosyltransferase, at 147,420 to 147,941
_00780
HUW76_00785: HUW76_00785 - MATE family efflux transporter, at 148,399 to 149,751
_00785
HUW76_00790: HUW76_00790 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, at 149,768 to 150,265
_00790
HUW76_00795: HUW76_00795 - D-glycero-beta-D-manno-heptose-7-phosphate kinase, at 150,267 to 151,232
_00795
HUW76_00800: HUW76_00800 - hypothetical protein, at 151,363 to 151,821
_00800
Group
Condition
HUW76
_00780
HUW76
_00785
HUW76
_00790
HUW76
_00795
HUW76
_00800
carbon source complex media
RCM (C)
-0.5
-0.7
N.D.
N.D.
+0.1
carbon source
butyrate (C)
-0.7
-0.5
N.D.
N.D.
+0.5
time0_primer_test
Time0_primer_test
-0.4
-0.1
N.D.
N.D.
-0.1
time0_primer_test
Time0_primer_test
-0.2
-0.1
N.D.
N.D.
-0.1
time0_primer_test
Time0_primer_test
-0.2
-0.1
N.D.
N.D.
+0.0
time0_primer_test
Time0_primer_test
-0.2
-0.1
N.D.
N.D.
-0.0
mouse
G1M1_D3
+0.0
-0.2
N.D.
N.D.
-0.1
time0_glycerolstock
Time0_glycerolstock
-0.2
+0.0
N.D.
N.D.
+0.0
time0_glycerolstock
Time0_glycerolstock
-0.2
+0.1
N.D.
N.D.
+0.1
time0_glycerolstock
Time0_glycerolstock
-0.0
+0.0
N.D.
N.D.
+0.0
time0_glycerolstock
Time0_glycerolstock
-0.0
+0.1
N.D.
N.D.
-0.0
mouse
G1M1_D7
+0.5
-0.5
N.D.
N.D.
+0.1
mouse
G1M3_D3
-0.1
+0.4
N.D.
N.D.
-0.1
mouse
G1M3_D4
+0.0
+0.3
N.D.
N.D.
-0.1
mouse
G1M1_D11
+1.2
-0.9
N.D.
N.D.
+0.1
mouse
G1M1_D4
-0.2
+0.5
N.D.
N.D.
+0.2
mouse
G1M1_D9
+1.0
-0.5
N.D.
N.D.
+0.2
carbon source
Rhamnogalacturonan I from potato pectic fiber (C)
+0.5
+0.0
N.D.
N.D.
+0.3
mouse
G2M5_D4
+1.1
+0.1
N.D.
N.D.
-0.0
mouse
G1M3_D7
+1.3
-0.0
N.D.
N.D.
+0.4
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