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Fitness for 5 genes in
Fusobacterium nucleatum SB010
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500 nt
HUW76_00710 and HUW76_00715 are separated by 103 nucleotides
HUW76_00715 and HUW76_00720 are separated by 37 nucleotides
HUW76_00720 and HUW76_00725 are separated by 57 nucleotides
HUW76_00725 and HUW76_00730 are separated by 149 nucleotides
HUW76_00710: HUW76_00710 - EamA family transporter, at 134,378 to 135,232
_00710
HUW76_00715: HUW76_00715 - hypothetical protein, at 135,336 to 136,532
_00715
HUW76_00720: HUW76_00720 - beta-Ala-His dipeptidase, at 136,570 to 138,030
_00720
HUW76_00725: HUW76_00725 - TetR/AcrR family transcriptional regulator, at 138,088 to 138,741
_00725
HUW76_00730: HUW76_00730 - sodium:glutamate symporter, at 138,891 to 139,160
_00730
Group
Condition
HUW76
_00710
HUW76
_00715
HUW76
_00720
HUW76
_00725
HUW76
_00730
carbon source complex media
RCM (C)
-0.3
-0.3
-0.3
-1.1
-0.3
carbon source
butyrate (C)
-0.3
+0.2
-0.1
+0.0
-0.5
time0_glycerolstock
Time0_glycerolstock
-0.2
+0.0
+0.0
-0.2
-0.2
time0_primer_test
Time0_primer_test
-0.1
+0.1
-0.0
-0.4
-0.2
time0_primer_test
Time0_primer_test
-0.1
+0.0
-0.0
-0.3
-0.2
time0_glycerolstock
Time0_glycerolstock
-0.3
+0.1
-0.1
-0.1
-0.2
time0_primer_test
Time0_primer_test
-0.0
+0.1
-0.1
-0.3
-0.3
time0_glycerolstock
Time0_glycerolstock
-0.1
+0.0
+0.0
-0.2
-0.2
time0_glycerolstock
Time0_glycerolstock
-0.2
+0.2
-0.1
-0.3
-0.2
time0_primer_test
Time0_primer_test
-0.0
+0.1
+0.0
-0.3
-0.2
carbon source
Rhamnogalacturonan I from potato pectic fiber (C)
-0.1
-0.3
-0.0
-0.2
+0.1
mouse
G1M1_D4
+0.6
+0.2
-0.4
-0.6
-0.1
mouse
G1M3_D4
+0.2
+0.4
+0.1
-0.9
+0.1
mouse
G1M1_D3
+0.2
+0.1
-0.0
-0.5
+0.1
mouse
G1M1_D11
+0.3
-0.1
+0.1
-0.6
+0.2
mouse
G1M3_D3
+0.2
+0.5
-0.1
-0.6
-0.0
mouse
G1M1_D7
+0.3
+0.1
+0.1
-0.6
+0.2
mouse
G1M3_D7
+0.6
+0.3
-0.0
-0.6
+0.0
mouse
G1M1_D9
+0.2
+0.2
+0.0
-0.5
+0.3
mouse
G2M5_D4
+0.4
-0.1
+0.0
-0.2
+0.3
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HUW76_00720
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