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Fitness for 5 genes in
Fusobacterium nucleatum SB010
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500 nt
HUW76_00505 and HUW76_00510 are separated by 326 nucleotides
HUW76_00510 and HUW76_00515 overlap by 1 nucleotides
HUW76_00515 and HUW76_00520 overlap by 8 nucleotides
HUW76_00520 and HUW76_00525 are separated by 100 nucleotides
HUW76_00505: HUW76_00505 - ferredoxin--NADP reductase, at 100,365 to 101,039
_00505
HUW76_00510: HUW76_00510 - glutaredoxin family protein, at 101,366 to 101,569
_00510
HUW76_00515: HUW76_00515 - ribonucleoside-diphosphate reductase subunit alpha, at 101,569 to 103,836
_00515
HUW76_00520: HUW76_00520 - ribonucleotide-diphosphate reductase subunit beta, at 103,829 to 104,863
_00520
HUW76_00525: HUW76_00525 - thioredoxin family protein, at 104,964 to 105,272
_00525
Group
Condition
HUW76
_00505
HUW76
_00510
HUW76
_00515
HUW76
_00520
HUW76
_00525
carbon source complex media
RCM (C)
-0.5
N.D.
-3.1
-0.7
-0.2
mouse
G1M1_D9
-0.0
N.D.
-2.2
-2.1
+0.4
carbon source
butyrate (C)
+0.1
N.D.
-3.2
-0.2
-0.1
mouse
G1M1_D11
+0.2
N.D.
-1.9
-0.7
+0.2
mouse
G1M1_D3
+0.2
N.D.
-1.2
-1.3
+0.3
mouse
G1M3_D7
+0.9
N.D.
-0.5
-2.1
+0.1
mouse
G1M1_D7
-0.2
N.D.
-1.1
-1.0
+1.0
time0_glycerolstock
Time0_glycerolstock
+0.3
N.D.
-0.5
-0.7
-0.4
mouse
G2M5_D4
+0.8
N.D.
+0.0
-2.3
+0.3
time0_primer_test
Time0_primer_test
+0.3
N.D.
-0.3
-0.7
-0.3
time0_primer_test
Time0_primer_test
+0.0
N.D.
+0.3
-0.8
-0.6
time0_primer_test
Time0_primer_test
-0.0
N.D.
+0.2
-0.7
-0.4
time0_glycerolstock
Time0_glycerolstock
+0.2
N.D.
-0.7
-0.0
-0.3
time0_primer_test
Time0_primer_test
+0.1
N.D.
+0.1
-0.1
-0.4
time0_glycerolstock
Time0_glycerolstock
+0.4
N.D.
+0.7
-1.2
-0.2
carbon source
Rhamnogalacturonan I from potato pectic fiber (C)
-0.6
N.D.
-0.0
+0.7
+0.0
time0_glycerolstock
Time0_glycerolstock
+0.5
N.D.
-0.4
+0.2
-0.2
mouse
G1M1_D4
+0.5
N.D.
-2.1
+2.5
-0.3
mouse
G1M3_D4
+0.1
N.D.
+0.1
+0.3
+0.5
mouse
G1M3_D3
+0.2
N.D.
+0.0
+0.8
+0.3
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