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Cofit
Protein
Homologs
Fitness for 5 genes in
Fusobacterium nucleatum SB010
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500 nt
HUW76_00120 and HUW76_00125 are separated by 122 nucleotides
HUW76_00125 and HUW76_00130 are separated by 17 nucleotides
HUW76_00130 and HUW76_00135 are separated by 9 nucleotides
HUW76_00135 and HUW76_00140 are separated by 341 nucleotides
HUW76_00120: HUW76_00120 - hypothetical protein, at 25,538 to 25,807
_00120
HUW76_00125: HUW76_00125 - ATP-binding cassette domain-containing protein, at 25,930 to 27,828
_00125
HUW76_00130: HUW76_00130 - EamA family transporter, at 27,846 to 28,751
_00130
HUW76_00135: HUW76_00135 - S8 family peptidase, at 28,761 to 30,254
_00135
HUW76_00140: HUW76_00140 - YbaN family protein, at 30,596 to 30,973
_00140
Group
Condition
HUW76
_00120
HUW76
_00125
HUW76
_00130
HUW76
_00135
HUW76
_00140
carbon source complex media
RCM (C)
-1.4
+0.1
-0.3
+0.1
-0.0
mouse
G1M3_D4
-0.1
+0.1
+0.2
-1.8
+0.1
mouse
G1M3_D3
+0.1
+0.1
+0.1
-1.5
+0.0
mouse
G1M1_D4
-0.2
+0.1
+0.1
-1.5
+0.4
mouse
G1M1_D9
+0.3
+0.3
+0.2
-2.3
+0.4
mouse
G1M1_D3
+0.6
+0.2
+0.1
-1.6
+0.2
carbon source
butyrate (C)
-0.4
+0.2
-0.3
+0.1
+0.0
mouse
G2M5_D4
+0.9
+0.4
+0.2
-2.4
+0.3
carbon source
Rhamnogalacturonan I from potato pectic fiber (C)
-0.8
+0.0
+0.3
+0.1
+0.1
mouse
G1M1_D7
+0.7
+0.1
+0.4
-1.7
+0.2
time0_glycerolstock
Time0_glycerolstock
-0.2
-0.0
-0.2
+0.1
+0.0
mouse
G1M1_D11
+1.2
+0.2
+0.3
-2.2
+0.3
time0_glycerolstock
Time0_glycerolstock
-0.1
-0.0
-0.1
+0.2
-0.1
time0_glycerolstock
Time0_glycerolstock
-0.2
+0.0
+0.1
+0.1
-0.0
time0_primer_test
Time0_primer_test
-0.3
+0.1
-0.1
+0.1
+0.1
time0_primer_test
Time0_primer_test
-0.1
+0.1
-0.1
+0.0
+0.0
mouse
G1M3_D7
+0.4
+0.2
+0.2
-0.9
+0.1
time0_primer_test
Time0_primer_test
-0.3
+0.1
+0.0
+0.2
+0.1
time0_glycerolstock
Time0_glycerolstock
+0.1
+0.0
-0.0
+0.3
-0.1
time0_primer_test
Time0_primer_test
+0.3
+0.1
+0.1
+0.2
-0.0
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HUW76_00130
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