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Fitness for 5 genes in
Fusobacterium nucleatum SB010
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500 nt
HUW76_00065 and HUW76_00070 are separated by 20 nucleotides
HUW76_00070 and HUW76_00075 are separated by 279 nucleotides
HUW76_00075 and HUW76_00080 overlap by 1 nucleotides
HUW76_00080 and HUW76_00085 are separated by 235 nucleotides
HUW76_00065: HUW76_00065 - toxin-antitoxin system YwqK family antitoxin, at 13,996 to 14,802
_00065
HUW76_00070: HUW76_00070 - toxin-antitoxin system YwqK family antitoxin, at 14,823 to 15,359
_00070
HUW76_00075: HUW76_00075 - UDP-glucose 4-epimerase GalE, at 15,639 to 16,628
_00075
HUW76_00080: HUW76_00080 - UDP-glucose--hexose-1-phosphate uridylyltransferase, at 16,628 to 18,157
_00080
HUW76_00085: HUW76_00085 - transposase, at 18,393 to 18,764
_00085
Group
Condition
HUW76
_00065
HUW76
_00070
HUW76
_00075
HUW76
_00080
HUW76
_00085
carbon source complex media
RCM (C)
-0.4
+0.2
-4.2
-0.7
+0.3
carbon source
butyrate (C)
+0.1
-0.1
-0.4
-0.1
+0.4
mouse
G2M5_D4
+0.5
+0.1
-5.1
+3.8
+0.8
time0_glycerolstock
Time0_glycerolstock
-0.2
-0.1
+0.6
+0.2
-0.3
time0_primer_test
Time0_primer_test
-0.2
-0.1
+0.7
+0.0
-0.2
time0_primer_test
Time0_primer_test
-0.0
-0.1
+0.7
-0.0
-0.2
time0_glycerolstock
Time0_glycerolstock
-0.3
-0.1
+0.6
+0.2
-0.0
carbon source
Rhamnogalacturonan I from potato pectic fiber (C)
-0.1
-0.1
+0.1
+0.0
+0.5
time0_primer_test
Time0_primer_test
-0.1
-0.2
+0.7
+0.1
-0.1
time0_primer_test
Time0_primer_test
-0.2
-0.0
+0.7
+0.1
-0.2
time0_glycerolstock
Time0_glycerolstock
-0.2
+0.0
+0.5
+0.2
-0.1
mouse
G1M1_D11
+0.5
-0.1
-2.4
+3.3
-0.4
time0_glycerolstock
Time0_glycerolstock
-0.0
-0.0
+0.6
+0.1
+0.2
mouse
G1M1_D7
+0.2
+0.4
-2.7
+2.9
+0.1
mouse
G1M1_D3
+0.5
+0.4
-2.5
+2.8
+0.1
mouse
G1M1_D4
+0.4
+0.1
-2.9
+3.6
+0.0
mouse
G1M3_D4
+0.5
+0.1
-3.2
+3.7
+0.3
mouse
G1M1_D9
+0.5
+0.3
-2.7
+3.1
+0.5
mouse
G1M3_D3
+0.1
-0.2
-2.1
+3.7
+0.2
mouse
G1M3_D7
+0.1
+0.6
-3.0
+4.3
+0.4
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